Pyxicephalus adspersus (African bullfrog): 140325552
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Entry
140325552 CDS
T11284
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
140325552 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pads02000
]
140325552 (ABCA5)
Transporters [BR:
pads02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
140325552 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_23
AAA_29
AAA_22
ABC2_membrane
AAA_5
AAA_30
AAA_16
Rad17
Motif
Other DBs
NCBI-GeneID:
140325552
NCBI-ProteinID:
XP_072259545
LinkDB
All DBs
Position
3:complement(5926030..5984325)
Genome browser
AA seq
1633 aa
AA seq
DB search
MSSEIKDVGVWAQTKTLLYKNYLIKCRTKKDTLQEILYPLIWSQIWLLLVLLMPNKHYEA
SPNDVLSDMEISPLPNIGYTPATNATETIMAVAMAHCLEPDVSITPYSDEESLKDASASF
LQFVGIKFEDSMSYKLMFFPFYIPKASVYMQEHCYSSSCAAAQYHYSGFTRLQACIDSAI
IKVKTNHSAWKELTRTKVMIMEKLPMVEVESYYHALMSICLVMAFSPFGCSPAAYIVAEK
EKKLKEFMKILGLHDTAFWLPWVLLYIVFILLVSLLMSSVTTSLTPFSHSNSLLVFMLYA
LYGISLIMFALMLTPLFKKAKQAGGVAFLCTLILSGLGIFIVLKDDFPKSFVWFFSPFCQ
CTFMIGIAQVMVLEQNEKGAQLFNLKDGPYPLIITYIFLVVDSVMYLLLASYLDQILPGE
YGLRRSPLFFLKPSYWSKRRRNYGVLSESFFSTNTDLSDMVEPVPLGLHGKEAIRIKNIH
KSFKKENRQMEALQGLTLDIYEGQITALLGHSGTGKTTLMNILCGLCPPSEGVATIYGHR
VTDIDEILDIRKVIGVCQQNDIHFEDLTVEENLSVFASLKGISKTVKEQEINKVLHDLDM
EALKHNQVKSLNIGQQRKLAVGIAVLGNPKVLLLDEPTAGMDSCSRYTVWNVLKKRKANT
VIVFSTHCMEEADILADRKAVISQGTLKCVGSSLFLKSKWGVGYRLSMDIKPTCNIASVS
ALVTQHVPGASLIQATESSLIYGLPLKEVDIFPGLFSALDNNCSLGVLTYGVSVTTLEDV
FFRLEAESDVDQTDNNIFTHQKIDDDRKWKSTEDIDQGLLSFPESDPCTVSGRALWKQQF
WTIAKLHFRNLYRDRKCVRNVSLSLFLFLAVQASVNIIHLYNQKPSIPLKLSSDLYFQRP
GQKSQKYLTSLLLQSSTGASIDEIIDHLHSQKIKVDLMNGTDYMSVAPHSGALDVISSGK
YFIYEAVFNSTMVHSLPVLINTISNTLLRQLHVNESIQVWSSPFPQEYLDVSFKITLYFL
VIYLGILAAGMLPYFAMENIYNHKVKAYTQLKMSGLYQSAYWVGQAAVDMTLFLLILCIM
LGTLFIFNKGISIYVGTFVALVFCLVGYVPAMVLLTYVASFTYRRISDTRQWWSIFFSMM
CLITITAVELASVIGNDLIFTVCHDMFSLFIPIYPLVGCLICFLKKSWKVSGDENSSIQL
GRVLVAVLSPYLQCIVLLLLLRYLEVKNGGKSIRKDPLFRTKDKKGKAWKFTEVSEDEDE
DIREERAQVGDYMASDCYEKPAIMVSGLHKEYKEKGKTIVGKTMRKLVVNNISFCVKRGE
ILGLVGPNGCGKSTCLDMMVGQTEPNAGQIFIGDPSPAEGGAAPMRFVGYSPQINHLWPE
IRLREHLETYGSIKGMSRNTLKEVIDRIVDALDMKEDVQKPTKKLSTGTQRKLCFALSML
GNPEIVLLDEPSTGMDTKAKQQMWKVIRSTFKGKEQAAILTTHFMEEAEAICDRVAIMVS
GQLRYIGSVQHLKSKFGRHYNLELKLDADSGPQQMEILHREILKHFPNACRQESFASLMS
YKVPKEDVQSLAQAFFNLGQVKRTFNVEEYSFSQSTLEQVFIELAKEQEEEDNFVTMNST
LCWNRRQEDTVAF
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgaaatcaaagatgttggcgtctgggcacaaaccaaaaccctcctgtacaag
aattaccttatcaagtgtaggacaaagaaggacacgttgcaggaaatcctctatccgctg
atctggtctcagatttggctgctgctggtgttgctgatgccgaacaaacattatgaagct
tctccgaatgacgtgctcagcgatatggagataagtccgctaccaaatattgggtacacc
ccggcgaccaatgcaacagagaccatcatggccgtggcaatggctcattgtcttgaacca
gatgtcagtattacgccctattcagatgaggaaagtttaaaggatgccagcgcttctttt
ctacagttcgttggcatcaaatttgaagactccatgtcgtacaagcttatgttcttcccc
ttctacattccaaaagcctctgtgtacatgcaagaacattgctattcctcttcttgtgct
gctgcccaataccattattcaggattcacacgcctgcaagcctgtattgattccgccata
ataaaggttaagaccaatcactcagcctggaaggagctaaccaggacaaaggtgatgata
atggagaagttgcccatggttgaggtagaaagctactaccacgcactcatgtccatatgc
ctcgtgatggctttctcgccatttggatgctcaccagcagcttacattgtagccgaaaaa
gaaaaaaaactgaaagagtttatgaagattctggggctccatgacacggcgttctggctc
ccatgggttcttctatacatcgttttcattctgctggtctctttactgatgtcgtccgtc
accaccagcttaactccatttagtcacagcaactcgttattggtctttatgctctatgcc
ctctatggaatatctctgatcatgtttgcactgatgttgacaccacttttcaaaaaagcc
aaacaagccggaggtgtggctttcctgtgcaccctcatcctcagcggtctgggtattttt
attgtgctgaaagatgactttccaaagtcctttgtgtggttcttcagtccattctgtcag
tgtacattcatgatcggcatagcccaggtgatggtccttgagcagaatgaaaaaggtgcc
cagctgtttaatctgaaagacggcccctacccccttataatcacctacatctttctagtg
gtggacagtgtgatgtacctgctcctagcatcgtaccttgatcagattctgccaggggag
tacggtttaagacggtcacctctattttttctgaagccatcttactggtcaaagagaagg
agaaattatggggtgctcagtgagagcttctttagcaccaacacagatctgagtgatatg
gtggagccggtaccgctaggcctgcacggaaaagaagccatcagaatcaaaaacatccat
aagtcttttaagaaggagaatcggcagatggaagcattacaagggctcaccttggacata
tacgaaggacaaataacagctttgcttgggcacagtggcaccggcaaaacaacactgatg
aatattttatgcggtctttgcccgccatctgaaggggtggctactatctatggacacaga
gtgaccgacattgatgagatcctggacatcaggaaggtgattggggtctgccagcaaaat
gacattcactttgaagacctcactgtagaagagaacctgtcagtcttcgcctcattaaag
ggaatcagcaaaacagtcaaggaacaagagattaataaggtcctccatgatttggatatg
gaagccctgaaacacaaccaggtgaaaagtctgaacattgggcagcaaaggaagctggca
gtgggcatagcggttctgggaaatcccaaggtgctgcttttggatgagcctacagcgggt
atggattcctgctcccgttacaccgtctggaacgtgctaaagaagaggaaagcaaacact
gtaatcgtgtttagcacgcattgcatggaggaagctgacatcctggcggaccggaaagct
gtcatctcacaggggaccctgaaatgtgttggctcctctctgttcctgaaaagcaagtgg
ggtgtaggctaccgcttaagcatggatataaagcccacgtgtaacatagcctccgtatct
gcgctggtcacacagcacgttcccggggcaagcctaattcaggcgacggagagttccctt
atatacggattaccattgaaggaagtggacatattcccaggattgttctctgctctggac
aacaattgcagcttgggtgtcctgacctatggagtctcggtcaccacattggaggatgtc
ttcttcagactggaagcagagtccgatgtggaccagacagataacaatattttcactcat
cagaagatagacgatgaccggaagtggaaatccacagaggatatcgaccagggcttactg
tcctttccagagtcagatccctgcactgtgagtggccgagctctgtggaagcagcaattc
tggacgatagccaagttgcatttccgtaacttgtaccgagaccggaaatgtgtccgaaac
gtgtctttatctctgttcctcttcctggcagtgcaagcttcagtaaacatcattcacttg
tacaaccagaagccctccatcccccttaaactatcttcagatctgtatttccaacgtcca
ggacagaagagccaaaagtacctcaccagccttcttctccagagctccacaggtgccagt
atagatgagataattgatcacctgcacagccaaaagataaaagtggatctgatgaatggg
accgactatatgtctgtcgcccctcacagtggtgctttggatgtcatcagttcaggaaag
tattttatctatgaagccgtgttcaacagtaccatggtgcactccctgccggtccttatt
aacactatcagtaacactctgctgagacagctgcatgtcaatgagagcatacaagtgtgg
agcagcccattcccccaggaatacctggatgtatcatttaagatcactctgtacttcctg
gtcatatatttaggaattttagctgctggaatgttgccttattttgctatggagaacatc
tacaaccataaggtgaaggcctacacccagctaaagatgtcaggcttataccagtctgcc
tattgggttggacaagctgcggtggacatgacgctgtttttgctgattctctgcatcatg
ttgggaactttatttatctttaataaggggatttcaatatatgttggaacatttgtcgct
ttggtcttctgcttggtcggctatgtgccagcgatggtgctgctaacctacgtggcttcc
tttacttacaggcgcatcagcgacacccggcagtggtggtcaattttcttttctatgatg
tgcttgatcaccatcactgctgttgaacttgcctctgtgatcgggaatgatttgatattt
acagtttgccatgacatgttctccttatttatccctatctacccattggtgggttgtttg
atctgtttcttaaagaagtcctggaaagtttcaggggatgaaaacagctccatacaacta
ggccgggtgctggtggcagttttgtctccatacttacagtgcattgtcctgttacttctc
ctgcgctacctagaggtgaaaaatggaggaaagtctatcagaaaagatccactgttcagg
acgaaagacaagaaaggtaaagcgtggaagttcacagaggtctcggaggacgaagatgag
gacatccgggaagaaagagcacaggttggcgactacatggcctccgattgttatgagaaa
ccggccatcatggtgagtggcttacacaaagaatacaaagaaaagggaaaaaccattgtg
gggaagacgatgagaaaacttgtggtcaataacatatcgttttgtgtaaaaagaggggaa
attctcggactggtggggccaaatgggtgtggtaaaagtacgtgtttggacatgatggtg
ggacagacggaaccgaatgccggacagatctttattggagatccgagccccgcagaggga
ggagcggccccgatgcgatttgtaggatattcccctcaaataaaccatctgtggccggag
atcagattgcgggaacatctggagacctacggctccatcaaaggcatgagcaggaacacc
ctgaaagaagtgatagacagaatagtggatgctctggacatgaaagaggatgtgcagaaa
cctaccaagaagttatcaacaggaacccagagaaagctgtgttttgccctgagtatgctg
ggtaatcccgaaattgtgcttctggatgaaccttccacagggatggacactaaagccaag
cagcagatgtggaaagtcatcaggtctacattcaaaggcaaagagcaggctgccatcctc
accacgcatttcatggaggaggctgaagccatctgtgaccgggttgccatcatggtttca
gggcaattgaggtatatcgggtcagtgcagcacctgaagagtaaatttggtcggcactac
aatctagaactgaaactagatgcagactccggtccccagcaaatggagattctgcatcgg
gagattcttaaacacttccccaatgcctgccgccaggagagctttgcatcactgatgtca
tacaaagttccgaaagaggatgtacagtctctagcacaggccttcttcaacctaggacaa
gtgaaacgtacctttaatgtagaagagtacagcttctcccaatctacactggaacaggtg
ttcattgaacttgctaaagagcaggaagaagaggacaactttgtaacaatgaacagcacc
ctatgctggaaccggagacaagaagacaccgtggccttctga
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