Pyxicephalus adspersus (African bullfrog): 140326015
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Entry
140326015 CDS
T11284
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140326015 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pads03021
]
140326015 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pads03036
]
140326015 (SMARCA2)
Transcription machinery [BR:
pads03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140326015 (SMARCA2)
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
140326015 (SMARCA2)
Chromatin remodeling factors
BAF complex
140326015 (SMARCA2)
PBAF complex
140326015 (SMARCA2)
GBAF(ncBAF) complex
140326015 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
140326015
NCBI-ProteinID:
XP_072260300
LinkDB
All DBs
Position
3:34821384..34925700
Genome browser
AA seq
1606 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPGVSHQLSSM
STDYPPEGMHQMHKPPMESMHDKGMSDEMHCATMKSSNMRPPHAGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQIPPAQPGLMLQGDQQVISQPSRGPSAFSQVQLH
QLRAQILAYKMLARGQPLSENLQLAVQGKRTLPAIQQQQPPQQPPQAQQQPTPQQPLGNY
KPPGMGMHPMGVPPAGTVPAPGIAGHAASMAPKPWAEGQSTDLGVASTPQKLAVPPPSGR
PSPAPPTAAPSVALPGPSVPQPTPGQQAPIVQFQQKQNRISPIQKPQGLDPVEILQEREY
RLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLET
ALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRS
VTGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAY
LLQQTDEYVANLTSLVWEHKKAQAAKEKKKRRRKKKVEETAEGMGSGLGPDGELIDESSQ
MSDLPVKVIHTETGKVLHAPDAPKASQLETWLEMNPGYEVAPRSDSEGSSSEYEEEDDDE
ESSRLESDEKKVSVSNTEEVAEQSAKHIIETAKQDVDDEYSMQTDAQQSQSYYGVAHAIT
ERVEKQSSLLVNGSLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH
KRLNGPYLIIVPLSTLSNWQYEFDKWAPSVVKIAYKGTPAMRRSLVPQLRSGKFNVLLTT
YEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLP
ELWALLNFLLPTIFKSCSTFEQWFNAPFAMTLERVDLNEEETILIIRRLHKVLRPFLLRR
LKKEVESQLPEKVEYVIKCDMSALQKILYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTI
MQLRKICNHPFIFQHIEESFAEHLGYANGIINGPDLYRTSGKFELLDRILPKLRATNHRV
LLFCQMTSLMTIMEDYFAFRNFQYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLLSTRAG
GLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAK
YKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNESQKKDELSGDNCQEGASQEED
EVPDDETLNQMIARHEEEFDLFMRMDLDRRREDARNPNRKPRLMEEDDLPSWIIKDDAEV
ERLTCEEEEEKIFGRGSRQRRDVDYSDALTDKQWLRAIEDGNLEEMEEEVRLKKRKRRRN
VDKVVEYVVKEDGEKKEKKRRGRPPAEKLSPNPPKLTKQMNAIVDTVINYKDSSGRQLSE
VFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSVGDLEKDIMLLCHNAQTFNLEG
SQIYEDSIVLQSVFKSARQKIAKEDESEDDSNEDEDDEDEDESESESAKSVKVKIKLNKK
EEKNRDKGKGKKRQSRGKAKPVVSDYDSDEDQDDNDQSEGSGSDDE
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgccaacagacccgggtgccatgcctcaccccgggccttcacctggacctggg
ccttcaccaggccccatcctaggacctagtccagggcctggaccttctcctggttctgta
cacagtatgatggggcctagccccggtcctcctggtgtctctcaccaactgtcaagcatg
agcacagattatccgccagagggcatgcatcaaatgcacaagccccccatggagagcatg
cacgataaaggaatgtctgatgaaatgcattgtgctactatgaagagctcaaacatgagg
cctccacatgctggtatgggtcctccccagagcccaatggatcagcacagtcaagggtac
atgtctcctcatccttcccccttaggagctccagaacatgtttcaagtcctatgtcaggt
ggtggtccaacacctccacaaataccaccagctcagcctggactcatgctgcaaggtgac
cagcaagtgatcagccagcctagtcggggtccctccgcatttagccaggtgcaacttcat
caacttcgcgcacaaatattggcctataaaatgttagccagaggacagccattgtctgaa
aacctgcaactagctgtacagggaaaaaggacattgcctgctatccagcaacaacaacca
ccacagcaaccaccacaagcacaacaacagccaacaccgcagcagccccttggtaattac
aaacctccaggtatgggaatgcatccgatgggagttccccctgctgggacagtaccagct
ccaggaatagccgggcatgcagctagcatggctcccaagccctgggcagaaggacaaagt
actgaccttggtgtagcaagcactcctcagaaacttgccgtaccacccccaagtggacga
ccatcacctgcaccacccactgctgctccctctgttgctctgcctggtccatctgttccc
cagcctactcctggacagcaagctcctattgtacaattccaacagaaacagaaccgcatc
agcccaatccagaaaccccaaggactggatcctgttgaaatattacaagaaagggaatac
agacttcaggctcgtattgctcataggatacaggaactggaaaacctgcctggctctcta
ccacctgacttgagaactaaggccacagtggagttaaaggctcttagacttttaaacttc
cagcgtcagctgaggcaggaagttgtggcatgcatgcgacgagacaccactcttgagact
gccctgaactctaaagcttacaagcgaagcaagcgtcagacacttcgtgaggctcgaatg
actgaaaagctggagaagcagcagaaaatcgaacaagaaagaaagcgcagacaaaagcat
caggaatatctcaacagtatattgcaacatgctaaagattttaaggagtaccacagatct
gtcactggcaaaatccaaaaactttccaaagctgttgccacatggcatgcaaatactgaa
agagaacagaagaaggagactgagcgaatcgaaaaagaaagaatgagaagacttatggct
gaagatgaagaaggatacaggaaactgattgatcagaaaaaagatcgccgtctggcctat
ctgcttcaacaaactgatgagtatgttgcaaaccttaccagcttggtgtgggagcacaaa
aaagcgcaagctgccaaagagaaaaagaagaggagaagaaagaagaaggttgaagagact
gcagaagggatgggatctggccttggccctgatggagagcttatagatgagagcagtcag
atgagcgacctgcctgtaaaggttattcacacagagacagggaaagtgctccatgctcca
gatgcacctaaagccagtcagcttgagacatggctggagatgaacccaggatatgaagtt
gctcctagatctgacagtgaaggaagtagctctgaatatgaagaggaggatgatgacgaa
gaatctagcagattggagtcagatgaaaagaaagtctctgtttcgaacaccgaggaagta
gcagaacaaagtgctaagcacatcattgagactgcaaaacaggatgtggatgatgaatat
agtatgcagacagatgcacaacagtctcagtcttactatggagtggctcatgccattaca
gagagagtggaaaaacaatcctctcttcttgtcaatggctcccttaaacaataccagatc
caaggtttggaatggatggtttctctatataacaacaatttaaatggaattctagctgat
gaaatggggcttggaaagacaattcagactattgcgctcataacgtatctgatggagcac
aagaggcttaatggtccctatctcattattgttccactctcgacattatccaactggcag
tatgagtttgataaatgggctccctcagtggtgaaaatcgcatacaagggaacaccagcc
atgagacggtctctggtgccacagcttaggagtggtaaatttaatgtcctgttgaccacc
tatgagtacattataaaagataaacacatccttgctaagatccgatggaagtacatgatt
gtggatgaaggacatcggatgaaaaatcatcactgcaagttaacccaggtgttgaacacg
cactatgtggctccaagacgaatcttgttaacaggcaccccactgcagaacaaactgcca
gagctttgggcccttctgaatttcttgttacctaccatctttaaaagctgcagcaccttt
gagcagtggttcaatgccccattcgctatgactttagaaagggtggatttaaatgaagaa
gaaactatactgatcatccgccgtctgcataaagtgttgcgtccctttttgctaagaagg
ctgaagaaagaggtggagtctcagttgccagaaaaggttgaatatgtaattaaatgtgac
atgtcagctctccaaaagattctttaccgccacatgcaaggaaaaggtattctcctcaca
gatggatcggagaaagataagaagggtaaaggtggagcaaaaacacttatgaacaccatc
atgcagctaagaaagatctgcaatcaccctttcatattccagcacattgaggaatccttt
gctgaacatctgggatatgctaatggcatcatcaacgggcctgacttgtacagaacctca
ggaaagtttgagttgcttgatcgaattttacctaagctgagagccacaaatcaccgtgtc
ctgcttttctgtcagatgacctcgctcatgacgatcatggaggattactttgcttttcgc
aactttcagtaccttcgccttgatggtactacaaagtcagaagacagagctgcattattg
aagaaatttaatgaagaaggttcacagtatttcatcttcttgcttagtaccagggccgga
ggtttgggactgaaccttcaggctgcagacacagttgttatttttgacagtgactggaat
cctcatcaggacttacaagcacaagacagagcacacagaattggtcagcagaatgaggtg
cgcgtgttacgtttgtgcactgtaaatagtgtggaggaaaagattcttgcagctgccaag
tacaaattgaacgttgatcaaaaggttattcaggctggaatgtttgatcagaaatcttca
agccatgaaagaagagcatttcttcaagccattctagaacacgaagaacagaatgagagc
caaaagaaagatgaactttcaggagataattgccaagaaggtgccagccaggaagaagat
gaagttcctgatgatgaaacgctgaaccagatgattgcacgccacgaagaagagtttgac
ctttttatgcgtatggatctagatcgccgtcgggaagatgcacgaaatccaaaccgcaag
ccacgtttgatggaagaagatgacctcccctcctggatcatcaaagatgatgctgaagtt
gaacgtctcacttgtgaagaagaagaagagaaaatattcggcagaggatcacgccaacgt
agggatgttgattatagtgatgcccttacagacaaacagtggctcagggcaatcgaggac
gggaatttggaggaaatggaagaggaagtccggttgaaaaagcgcaaaagacgaagaaat
gtggataaagttgttgaatatgttgtaaaggaagatggtgaaaagaaagagaaaaaaaga
aggggacggccccctgctgaaaagttgtcaccaaatccaccaaagctgaccaagcagatg
aatgctatagtcgatactgtaataaactataaagacagctctggacgacagctaagtgaa
gtcttcatccagctcccctcaagaaaagaactgccagagtattatgaattaatccgtaaa
cctgttgacttcaaaaaaataaaggaaaggattcggaatcacaaatatagaagcgtaggt
gacctggagaaggacatcatgttgctttgccacaacgcacagacatttaacctcgaaggg
tcacagatatatgaagattccattgtgctacaatcagtttttaagagtgcaagacaaaag
attgcaaaggaggatgaaagtgaagatgacagcaatgaagatgaagatgatgaagacgaa
gacgaatctgaatctgagtcagcaaaatcagtgaaagtgaaaatcaagctaaataagaag
gaagaaaagaacagagataaaggaaagggtaaaaagcgacagagtcgtggtaaagctaaa
ccagttgtcagtgattatgacagcgatgaagatcaagatgacaatgatcaatctgaagga
agtggaagtgatgatgagtga
DBGET
integrated database retrieval system
