Pyxicephalus adspersus (African bullfrog): 140326501
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Entry
140326501 CDS
T11284
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03018
RNA degradation
pads03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140326501 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
140326501 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140326501 (LSM4)
03041 Spliceosome [BR:
pads03041
]
140326501 (LSM4)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140326501 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
140326501 (LSM4)
Spliceosome [BR:
pads03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140326501 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
140326501
NCBI-ProteinID:
XP_072261250
LinkDB
All DBs
Position
3:complement(71318826..71327494)
Genome browser
AA seq
125 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVMSKGRGRGGMQQQKQMKGRGGGGAGRGKSAYRTIFSE
GYVTF
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctttatctctgttaaaaacggcgcagaaccatccaatgttggttgaattaaag
aatggtgaaacctacaatgggcacttggttagctgtgacaactggatgaacatcaatcta
cgtgaagtaatttgtacttctagggatggtgacaaattttggagaatgcccgaatgctac
atacgtggaagcacaattaaatacttgcgcatccctgatgaaattattgatatggtaaaa
gaagaggtgatgtcaaagggcagaggtcgtggaggaatgcagcaacagaagcaaatgaaa
ggaagaggaggtggcggagctggacgcggtaagtctgcatatagaacaatatttagtgaa
gggtatgtaaccttttaa
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