Pyxicephalus adspersus (African bullfrog): 140326881
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Entry
140326881 CDS
T11284
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140326881 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pads03021
]
140326881 (SMARCA5)
03036 Chromosome and associated proteins [BR:
pads03036
]
140326881 (SMARCA5)
Transcription machinery [BR:
pads03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
140326881 (SMARCA5)
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
140326881 (SMARCA5)
RSF complex
140326881 (SMARCA5)
WICH complex
140326881 (SMARCA5)
B-WICH complex
140326881 (SMARCA5)
NORC complex
140326881 (SMARCA5)
BRF complex
140326881 (SMARCA5)
NuRF complex (fruit fly)
140326881 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
RRG8
AAA_14
Pox_A30L_A26L
Motif
Other DBs
NCBI-GeneID:
140326881
NCBI-ProteinID:
XP_072261973
LinkDB
All DBs
Position
3:103648873..103668501
Genome browser
AA seq
1038 aa
AA seq
DB search
MSEENAEQQKLEAMEEEMAGEEGGKKPEQAGEEAGVKEEAMEEGESENEEGDSPVKQKDD
ADPAYEEKRQTDRSNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRLKKDEKQNL
ISAGDNRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKGGTLRDYQIRGLNWLISLY
ENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLHNWMSEFKRWVPSL
RAVCLTGDKEQRAAFVRDVLLPGEWDVCVTSYELLIKEKSVFKKFNWRYLVIDEAHRIKN
EKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCL
GDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEIKIYVGLSKMQREWYTKILMKDIDIL
NSSGKTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLATNSGKMVVLDKLLPKL
KEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDDRQESILAYNAPGSSKFIF
MLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEE
RIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITDEDIN
AILERGEKKTAELKEKLSNMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEPPK
RERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKT
IGYKVPRNPELPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIK
ANEKWGRDDIENIAREVEGKTPDDVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRV
SIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQ
CIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENLELEEKEKAEKKKRGPKATSAQK
RKLEGAADGRGRKKKLKL
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggagaacgccgagcagcagaagctggaggcgatggaggaggagatggcgggg
gaagagggcgggaagaagccggagcaggctggggaagaagccggtgtaaaggaggaagcg
atggaggaaggagagtctgaaaatgaagaaggtgattcccctgttaaacaaaaggatgac
gcagatcctgcctatgaggagaaaagacaaactgacaggtccaacagatttgagtatctc
ctgaaacagacagagctgtttgctcactttatacagccagcagcacagaagacaccaact
tcaccattaaaaatgaagccagggcgtcctcggctaaagaaagatgaaaagcaaaattta
atatctgctggagataatcggcatcggagaacagagcaggaagaagatgaagagctgtta
acagaaagttcaaagacgacaaatgtttgtaccagatttgaggaatctccttcttatgta
aaaggtggcacattaagggattatcaaatcagaggcttgaattggctgatctccttatat
gagaatggaataaatggtatcctggctgatgaaatgggtctgggtaagactctacagacc
attagtcttcttgggtacatgaaacattataggagcatccctgggccccacatggtgtta
gtcccaaagtctaccttgcacaattggatgtctgaatttaaaagatgggtgccatccttg
cgtgcggtgtgtcttacaggtgacaaggagcagagagcagcttttgtcagagatgttctt
ctgccaggtgaatgggatgtgtgtgtgacatcttatgaattgttaatcaaggagaaatct
gttttcaagaagttcaactggagatacttagttattgatgaagcccataggattaaaaat
gaaaaatcaaagttgtctgaaattgtgagggaattcaagacgactaaccgtctccttcta
actggaaccccccttcaaaacaatctgcatgaactttgggcactcctgaattttcttttg
cctgatgtctttaactcttcagaggattttgactcttggtttgataccaataattgtctt
ggagatcagaaactagtagaacgtcttcatatggtgttgaggccattccttctccgtcgt
attaaggccgatgtggagaagagccttccccccaagaaagaaattaaaatctatgttggc
cttagtaagatgcaaagagaatggtatacaaaaatcctgatgaaggatattgacattttg
aattcttcaggaaagactgataaaatgcgacttttgaatattctaatgcagctgcgaaaa
tgttgtaatcatccatatctttttgatggtgctgagccaggcccaccatacactacagat
atgcacttggctactaatagtggaaaaatggttgttctagacaaattgcttccaaaactg
aaggaacaaggttcacgtgtactgatattcagccaaatgacaagagtcttggacatcttg
gaagattattgtatgtggcgaaactatgaatactgccgactggatgggcaaacaccacat
gatgatagacaggaatctatacttgcatataatgctcctggtagctcaaaatttattttt
atgttgagcacacgtgctggtggtcttggcattaaccttgctactgctgatgttgtcatt
atatatgattctgactggaaccctcaagttgaccttcaagccatggatagagcacacaga
attggacaaacaaaaacagtccgagtcttcaggtttattacagacaatacagttgaagaa
cgtattgttgagagagcagaaatgaagctgcgcttggattccatagttattcagcaaggc
aggttagtggatcaaaatttaaataaacttggaaaggatgaaatgctgcagatgattcga
catggtgccacacatgtatttgcatcaaaggatagtgaaatcactgatgaagatattaat
gctatcttggaaagaggtgaaaagaagactgcagaattaaaagaaaagctctcaaacatg
ggtgagagttcattgagaaacttcactatggatacagaatccagtgtgtacaactttgaa
ggagaagattacagagagaagcaaaagatggcatttacagagtggattgaaccaccgaaa
cgtgaaagaaaggccaattatgccgtggatgcatactttagggaagcacttcgcgttagt
gaaccaaaaataccaaaagctccccgcccacccaagcagccaaatgttcaggactttcag
ttctttcctccacggctgtttgaactattggagaaggaaattctgtactacagaaaaaca
attggttacaaggtcccacgcaatcctgaattacctaatgctgcccaggcacaaaaggag
gaacagttaaaaattgatgaagcagagccactaaatgatgaagagctagaagaaaaggaa
aaattgttgacacagggctttaccaattggaacaaaagagattttaaccagtttattaaa
gccaatgaaaaatggggacgggatgacattgaaaatattgcccgtgaagttgaaggcaaa
actccagatgatgtaatggagtattcagctgtcttttgggaaagatgtaatgaactccaa
gatatcgaaaaaataatggctcaaatagaaagaggagaagctcggatacagaggagagta
agcattaagaaggctttagacacaaagattggtcgatacaaagcaccatttcatcaatta
aggatatcatatggcacaaataagggaaaaaactacacagaggaggaagaccgttttcta
atctgcatgctacacaaacttggttttgataaggaaaatgtgtatgatgagcttaggcaa
tgtatccgtaactctccacagttcagatttgactggtttctgaaatccagaactgcaatg
gaacttcaaagaagatgtaatactttaatcacattgattgaacgggagaacttagagtta
gaagagaaagagaaagccgagaaaaagaaacgtggaccaaaggcaacttcggcacagaaa
cggaaattggagggtgctgctgatggcaggggaagaaagaaaaagcttaaactttaa
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