Pyxicephalus adspersus (African bullfrog): 140327118
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Entry
140327118 CDS
T11284
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03030
DNA replication
pads03410
Base excision repair
pads03420
Nucleotide excision repair
pads03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140327118 (RFC1)
03410 Base excision repair
140327118 (RFC1)
03420 Nucleotide excision repair
140327118 (RFC1)
03430 Mismatch repair
140327118 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pads03032
]
140327118 (RFC1)
03400 DNA repair and recombination proteins [BR:
pads03400
]
140327118 (RFC1)
DNA replication proteins [BR:
pads03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140327118 (RFC1)
DNA repair and recombination proteins [BR:
pads03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140327118 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
PTCB-BRCT
AAA_22
AAA_30
AAA_14
BRCT_2
AAA_5
AAA_7
AAA_18
RuvB_N
Rad17
AAA_19
TIP49
AAA_17
AAA_33
nSTAND3
NTPase_1
RNA_helicase
Zeta_toxin
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
140327118
NCBI-ProteinID:
XP_072262419
LinkDB
All DBs
Position
3:127052282..127070211
Genome browser
AA seq
951 aa
AA seq
DB search
MGNIRRSNKKLVEVKKEKPRKSSSDSGMDDEAIARQLQLAEDEELERQLHEDEEFARTLA
MIDDMPKDKVQKVSPKKPSSTVTETSPAKEKSISSGNATSKKTSPVKTSSKLALMKQKDE
AHKKEKDKSSPVSKAKVTTPKKEQPNAVVLSPKKEQPKAAVISPKKEFTTPVRSSQRPSE
TSPEDSEKKRGNYMAYRNYLNREGPKALGSKEIPQGADNCMEGLTFVITGVLESMERDEA
KSLVERYGGKVTGNVSKKTNYLIMGRDAGESKRVKAESFGTKIIDEDGLIDLIRTLPGKK
SKYVIAAEAEGKVKTEKTPEKKKEPQVKQSPAKRKLTPQKRESPRAKKLASVSKLSSDSE
KTSIKQEKPASARSLESAGGKTESLLWVDKYRPTSLKGIIGQQGDQSCANKLIRWLKDWH
KNHSGDKKPVAKYNKFGGKDDGSSSKAALLSGPPGVGKTTTAVLVCEELGYSYVELNASD
TRSKNSMKEVVAESLNNTSIKGFYSGASKSVNNKHVLIMDEVDGMAGNEDRGGVQELISL
IKQSKIPIICMCNDRNHPKIRSLANYCFDLRFQRPRVEQIKGAMMSVAFKEGLKIPPPAM
NEIILGANQDIRQVLHNLSMWSASNKALTYDEAKSNANNAKKDIKIGPFDVVRKVFGSDG
DNSHMTLIDKLDLFFHDYSMAPLFVQENYIHVKPAAAGGNIKKHLLLLSKTADSICDGDL
VDRAIRSKQTWSLLPTQAIYASVLPGELMRGYMSQFPNFPSWLGKYSSTGKYDRITQELA
MHTSLRTRTSKSALNLDYLPYLRDRLVQPLINLGTEGVQEVVDLMDTYYLMKEDFDNIME
ICSWGGKPSPFSQVDSKVKSSFTRSYNKESHLTPYSLQMVKATKRETATPLESEYGEDVN
PEDNQAEENEDDVGVDAMIKAKKAKSSKPSKPSKAEKDGDKKQAKSKTKKK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacattaggcgatcaaacaagaaacttgtggaagtcaagaaggaaaagcctagg
aaaagcagttctgattctggaatggatgatgaagccattgctagacagttacagcttgca
gaggatgaagagctggaaagacaacttcatgaagatgaggagtttgcccgaacattggca
atgatagatgatatgccaaaggataaggtacaaaaagtcagcccgaagaagccgagctca
acagtcactgaaacaagccctgcaaaggaaaaaagcatttcttcaggcaacgcgacttca
aagaagacatctccagtaaaaactagctccaagctggcccttatgaaacaaaaggatgaa
gcacacaaaaaggagaaggataaatccagccctgttagtaaagcaaaagttaccactcca
aagaaggagcagccgaatgctgtggttctgtcaccgaagaaggagcagccgaaagctgcg
gttatctcgccaaaaaaagagtttaccacaccagtacgatcatctcagagaccctcggag
accagtcctgaagattctgaaaagaaacggggaaactatatggcatatagaaattatctt
aatcgagaaggtcctaaagctttgggatccaaggaaattccccagggtgcagacaattgc
atggagggcttgacctttgtcataactggagtcctggagtccatggagcgagatgaagcc
aagtcattagtagaacgttatggaggaaaggtaacgggaaacgtcagcaaaaagaccaat
tatcttatcatgggccgtgatgctggggagtccaaacgtgtgaaggcagaaagctttggg
accaaaattattgatgaggatggcctaattgacttaattcgcaccttacctggaaagaaa
tccaagtatgtgatagcagctgaagcagaggggaaagtaaaaactgaaaagacaccagaa
aagaagaaagagccacaagttaaacaaagcccagctaagaggaagctgactccgcagaag
agagaatcaccgcgggccaagaaactagcttctgtttctaagctgtcaagtgattctgaa
aaaacgagtataaaacaagagaagccggcctctgccagatcactggaatccgcaggtggc
aagacagagagtctactttgggtggataaatacagaccaacatcgctaaaggggatcata
gggcagcagggagatcaaagctgtgctaataagcttattaggtggctgaaagactggcac
aaaaaccactctggagacaagaaacctgttgcaaaatataacaaatttggaggcaaggat
gacggatcatcatctaaagcagcccttttatctggtccaccaggagtcggtaaaactaca
acggcagtgctggtttgcgaggaacttggctacagttatgtagaactaaatgccagtgac
actcgcagcaaaaacagcatgaaagaagtagtggcagaatctttgaataataccagcatc
aaagggttttattcaggggcgagtaagtctgtaaacaacaaacatgttctgatcatggat
gaagtggatggtatggcaggaaatgaagacagaggtggcgtacaggaattaatctctttg
atcaaacagtcaaagatccccattatatgcatgtgtaatgatcggaatcaccctaaaatc
cggtcgctggctaactactgctttgacctccgcttccagaggcccagagtggagcagatt
aagggagcaatgatgtctgtggcgtttaaggaaggactgaaaattccaccaccagctatg
aatgaaattatccttggggccaatcaagacattcggcaggttcttcataaccttagtatg
tggagtgctagcaataaggccttgacatatgatgaagcaaagagtaatgcaaacaatgcc
aaaaaggacatcaaaataggtccttttgatgttgtgcgcaaggtgtttggtagtgatgga
gacaattcccatatgactcttatagacaagctggacctcttctttcatgactactcgatg
gcacccctctttgttcaggaaaattatatccatgtaaagccagctgcagcaggtggaaac
atcaagaaacacttactactgttgagcaaaacagctgatagcatatgtgatggtgacttg
gtggacagggctatccgcagtaagcagacctggagcctcctccctacacaggcaatctat
gccagtgtcctgcctggagaattgatgagaggttacatgtctcagtttccaaattttcct
agctggcttgggaaatattcttctactgggaaatacgatcgtatcactcaggagctggct
atgcatacgtctctgagaacacggacaagtaagagtgctttgaatctggattacctaccc
tatttaagggacaggctggtacagccacttataaacctgggcacagaaggagtgcaggaa
gtggtggatctgatggacacatattacttaatgaaagaagactttgacaacattatggag
atctgcagctggggtggaaaaccaagccccttctcccaagttgattccaaggttaagagc
tcttttacacgcagctataacaaagagtctcatctcaccccatactctctgcaaatggta
aaagccacaaaacgagagactgccacaccgctggagtctgagtatggcgaggatgtgaat
cctgaagacaatcaagctgaagaaaatgaagatgatgtaggcgtagatgccatgatcaag
gcaaaaaaggcaaaatcatctaaaccatcaaaaccttccaaagcagaaaaagatggagac
aaaaagcaggcaaaatcaaaaaccaagaagaagtga
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