Pyxicephalus adspersus (African bullfrog): 140327136
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Entry
140327136 CDS
T11284
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140327136 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pads01009
]
140327136 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pads04515
]
140327136 (PCDH7)
Protein phosphatases and associated proteins [BR:
pads01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140327136 (PCDH7)
Cell adhesion molecules [BR:
pads04515
]
Cadherins
Protocadherins
140327136 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Motif
Other DBs
NCBI-GeneID:
140327136
NCBI-ProteinID:
XP_072262449
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All DBs
Position
3:complement(128552298..129061861)
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AA seq
1266 aa
AA seq
DB search
MRTLWGCCALLLRLSLTLAASKQLLKYRIAEEGQPDIRIGNVASDIGIVTGSGEVTFSLE
SGSDFFKIDNMTGELSTNERRIDREKLPQCQMIFDENECFIDFEVSVIGPSQSWVELFEG
RVVILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERYELIPDAGES
LFVSGRRGSGESAMYPGKRRMESDGRSSVFELQVADTSDGEKQPQLIVKGALDRELRDSY
ELTLRVRDGGEQPRSSQSILRVLITDVNDNSPRFEKSVYEADLAENSAPGTPILQLKATD
YDVGVNGQIEYVFGAATESVRRLLRLDENSGWLSVLHRIDREEVNQLRFTVMARDRGQPP
KTDKATVILNIKDENDNVPLIDIRKIGRIPVKDGMASVAEDVLVDTPIALVQVSDRDQGE
NGVVTCTVVGDVPFQLKPASDSEGEQNKKKYFLHTSAPLDYENVKEYNVIIVAVDSGSPS
LSSNNSLLVKVVDTNDNAPVFSQPVVEVAFPENNVPGERVATVIATDADSGKNAEIAYSL
EQSVAGVFSIHPDSGDITANIVLDREQTDRYEFKVVAKDKGLPNVMQGTATVVVQVADTN
DNDPKFMQDVFNFYVKENLQPNSPVGMVTVMDADKGRNAEMSLFIEEDNGIFTIENNTGT
ICSTMSFDMEQQTSYTFKVKAVDGGDPPRSATATVSLFVMDENDNAPIITSPINSSYAVV
PPSSSVRTVVATVVATDTDSGVNKELNYSIIGGNPFKLFEINPASGVVSLVGKLASKHYG
LHRLVVQVNDSGQPPQSTTALVHVFINETVSNASVVDSQIARSLHTPLTQDIAGDPSYEM
SKQRLSIVIGVVAGIMTVILIILVVVMARYCRAKGNNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKNKKSKQPLYSSIVTVEASKPNGQRYDSVNEKLSDSPSMGRYRTVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNN
KYSKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNY
ERTTPDGSVGEAEHMENGCDNRPQLPPLGLRDHESQATSSETFPGRRFTQRWANTLPICP
RDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKPKNQPKLSTFMPVDERDSQEK
LANGEVSLMGDRNRNLLNKKLASYETFSAATFSKSEEANPEDIPLKQTGEYKPSPVNTLT
RREVYL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccttgtggggttgctgcgcgctgttgctgcggctgtcgctgaccctggccgcc
tccaagcagctgctgaagtaccggatcgccgaggaaggacagccagacatcaggatcggt
aacgtggcatcggacatcggtatagtgaccggctcgggcgaggtgaccttcagcctggag
tccggctccgacttcttcaagatagacaacatgaccggcgagctgagcaccaacgagcgc
cgcatagaccgggagaagctgccgcagtgccagatgatcttcgatgagaacgaatgcttc
atagacttcgaggtgtcggtgatcggtccctcgcagagctgggtggagctgtttgagggc
agggtggtcatcctggacattaacgataacacaccgaccttcccgtccccggtgctcacc
ctgacggtggaggagaatcggccggtggggactctctacctgctccctaccgccacagac
cgggacttcggccggaacggcattgagcgctacgagctgatcccggacgccggggagagc
ctgttcgtgtccggtagacggggcagcggggagagcgctatgtacccggggaagaggcgg
atggagagtgacgggcggagcagcgtgttcgagctgcaggtggcggacacctcggacggg
gagaaacaaccgcaactcatcgtgaagggggccctggaccgggagctccgcgattcctat
gaactcaccctgcgggtccgggacggaggggaacagccgcgctcctcgcagtccatcctc
cgggttctcatcaccgacgttaacgataacagcccccgctttgagaagagtgtgtacgag
gccgacctggcggagaatagcgcccctgggacccctatcctacagctcaaagccaccgac
tacgacgtgggggtgaacgggcagatcgagtatgtgttcggtgccgccaccgagtcggtg
aggagacttctccgattggatgagaactcgggctggctgagcgtcctgcaccggatagac
cgggaggaggtcaaccaactccgcttcactgtcatggcccgggaccgggggcagccccct
aaaacggataaagccaccgtcatcctgaatattaaagatgagaatgataacgtgcccctg
atagacatcaggaagatcggtaggatcccggtgaaggatggcatggccagtgtggcagag
gatgtgttggtggatacccctattgccctggtgcaggtgtctgatagggatcagggggag
aatggagtggtcacctgcactgtggttggggatgtccccttccagctgaagccagccagt
gatagtgagggggaacagaacaagaagaaatactttctgcacacttcagcccccctggac
tatgagaacgtcaaggagtacaatgtcatcatagtggccgtggattccggaagtcccagc
ctgtccagtaataactccctgctggtcaaggtggtggacaccaacgacaacgcgcccgtc
ttcagccagccggtggtggaagtggcctttccagagaacaatgtgccaggggaaagagtg
gccactgtcattgccaccgatgccgacagcggcaaaaacgcagagattgcctattccctg
gagcagtccgtggccggggtcttctccattcaccccgattctggggacatcacagccaac
attgttctggaccgggagcagactgaccgatatgagttcaaagtcgtggccaaagacaaa
ggtctgcccaacgtcatgcaaggcaccgccaccgtggtggtccaagtggccgacaccaat
gacaatgaccccaagttcatgcaggatgtgttcaacttttacgtcaaggagaacttacaa
cccaacagccctgtgggcatggtgacagtgatggatgctgacaaaggtcgcaatgcagag
atgagtttgtttatagaggaagacaatggcatctttaccatagagaacaacactggcacc
atctgttccacaatgtccttcgacatggagcaacaaacttcttacacctttaaagtcaaa
gcggtggatggtggcgaccctcctaggtctgctacagccacggtgtccctttttgtcatg
gatgaaaatgataatgcccccatcatcactagtcctatcaatagctcttatgctgtggtc
cccccttctagcagtgtcaggacagttgttgccacagttgtagccacagacactgactct
ggagtcaacaaagaactcaattatagcattattgggggaaatccctttaaactctttgaa
atcaacccagctagtggtgtggtgtcactggttgggaagctggcctccaagcactatggc
cttcaccgcctggtagtccaagtcaatgacagcggtcaaccgccacagtccaccacagcc
ctagtccatgtgtttattaatgaaactgtctctaacgcctctgtggttgattcccagatt
gccagaagtttgcacacccctttaacccaggacatagcaggagaccccagctatgaaatg
agcaagcaaagattaagcatagtgattggtgtagtggctggcatcatgacggtcatactg
atcatactggtggtggtcatggcacgctactgcagggccaaaggtaataatggctacgaa
gctggcaagaaagatcacgaggacttctttacgcctcagcagcatgacaagtctaaaaaa
cccaaaaaggataagaaaaataaaaagtccaaacagccattgtatagcagcatagtgaca
gtggaggcatcaaagccaaatgggcaaagatatgacagtgtgaatgaaaagctctctgat
agccccagcatggggagatacagaactgtgaatggaggtcctggaagtcctgacctagca
aggcattacaaatctagttccccactacctactgtgcagcttcatccccagtcacctact
gctgggaaaaagcaccaggctgtgcaagatttaccaccagccaacacttttgtaggagct
ggagacaacatctcaattggatcagatcactgttctgagtacagttgtcagaccaataac
aagtacagcaaacagccatttcgtagagtgacgttttctgttgtgagtcaacctcaggac
cctcaccaggggtcattgcagagttgctatgacagcggattggaagaatcggagacgccg
agtagtaagagctcatctggaccacgactgggtgccctacctctcccagaagacaactac
gagcgaactacgccggatggcagtgttggtgaggcagagcatatggaaaatggctgtgac
aatagaccccagctgccacccttgggcttaagggatcatgagagccaggccaccagtagt
gaaacatttccaggaagacgcttcactcaacgatgggcaaataccctaccaatctgcccc
agagactcaagacctttgccagatgtagctctgactggtaaatgcacaagagaatgcgat
gaatacgggcactctgactcctgctggatgccagttcgtacatcacctgaaaggaagccg
aagaaccagccaaagctttccacatttatgccagtcgatgaacgagatagccaagaaaag
cttgccaatggagaggtttcactaatgggagatcgcaacaggaatctacttaacaaaaag
ctggcatcatatgagaccttcagtgcagccacgttcagtaaaagtgaagaagccaatcct
gaggatattccccttaagcaaacaggggagtacaagccatctcctgtcaacactttaact
agaagagaagtttacctgtga
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