Pyxicephalus adspersus (African bullfrog): 140327394
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Entry
140327394 CDS
T11284
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pads03036
]
140327394 (SHOC1)
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Meiosis-specific proteins
Others
140327394 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
DUF5967
Motif
Other DBs
NCBI-GeneID:
140327394
NCBI-ProteinID:
XP_072262885
LinkDB
All DBs
Position
3:49402372..49476474
Genome browser
AA seq
1514 aa
AA seq
DB search
MPHVNNPKQTLSFPITKLAITEIGYSVSHGNFTFEMKKATFPAFKFLALDYAFENVMKQN
ISMSWMLIPFPNGILQEEDYCHTKVFVNDMYRTPWKTSIPTFNIQETDSILDMWKANAST
DFLERKEEALAIVPSSNPCSPTDLEDVCLITESCADEASHTDKYWKIIPSDETECYLLPE
EAVFVDCLTQYRQHLPSLSTLQNRLKTIPVEDPLPDWKETLPDEELLFRMDTFVEKDLEP
DFLLEDFHPLIQNGAEHLSLPYIVEMDEDATARRFSISDLITVLQLAPEDMLETVSEGLL
SQISSKQELIEQNTTDRNIDIPKYKDIVEKVCFSLYHVAELEVTFSPPHQAFKETEKEQS
INLDEEVLSPICSTYQCVYLLFIYLIILFYISFYNTGRPEDILEYLESDAAIQFPLLKDP
YIPVVLPHYTIDQLIEQTCIETEKLVDMTLVDNWWNKFGLPDNHDTIIETLDSDSTTLSL
DSKIMSVTKITPDQLERILEENNTCFQQEDNFLKTGTRVKAHSSSPPQIIVPCPPIHTQG
NVTLSIDSCGADNTIISYNEDCQLDKSPSFPKGHNVKQSAPSTSHTLSLGDFSEEHKWQD
IGIKGPGVLENDDVDPLASFIILRTKRSLDQYEEKHTDTYPEQVSDAENRQTQQIGSHDL
SSDAVSHQEFTEGPKHQAITVPFTASESQCQAYRVLHAAAVPVLNKLTVLGVSACAEWKF
ATVCFDSTRFLLCQQERNVTNRCKTGQKKNKDIIIFKNASFLHILVTLRDLILMCTLDAA
LEYLCNAKNIYKSVLESCLNDVWRKLRIIQYVKDKTKETDPKITALLELIEEAYTKQKEL
KILILSRMDSEAIKETINNYIEKTKGLKAIFLCPVNGNAFLDPENVLDSLRNYSYVIVNN
QYIGSNFPWAHFSLVIENDCTDVWLKLCQDLNVSHITLKSHLPDLSAMDTSTYGEKEFLL
HIQIPYIFLSSEDLTIYPEILNLLESRYNMTFIERECSPSLQLFGKASRCALITVDESTV
IILQSLEGLMPDKSAENLILKLVALSLQYSCCWLLFYVKERLNSEYNFAGTALHSVVLVY
AAITAYLSKSDDLQIKTFISTGIDNTGLLVRRIADHTLMLSASDPYKWLDKSWLSILPTE
EERGLLLFPSVNPLVAQRMLSRGPSLQWLLSANKDQLGELFPEIPSKVIKHFSDITALHK
LSTSAASHRPFEISVPAAREDCISHDNIQISLSDIDKHNSCNALDSSKTKLGSSGLLKPV
DIRASNNVSKSSHLSEEDVQQNYQDSAMRNNQIVKQTQLSSKFSPLQSCQHATKTKSMRF
SHKYYSEATFLSFSKQQNRTAQAQNVSEQYYQQSTNELPSHKCSPDMLSSEEDGILSQHN
YYGTQGKSNFSVHREHIFANESGHQNSTNSVYSKNRLEDVICLSKETTAENPSVYLQCGS
EDIYSPFPLIPNNEHLDDLTFSEIASTGKRKFTINNVTAKETIAGIQLSQQKRRKLIYEK
VPGRCDGQTRLKFF
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgccccatgtaaacaaccctaaacagacactatcattcccaattacaaaactggccatt
acagagattggttattctgtatcacatggtaactttacctttgaaatgaaaaaagcaact
tttcctgcatttaagtttcttgccctggactatgcttttgagaatgtcatgaaacaaaac
atttccatgtcttggatgcttattcctttcccaaatgggattctacaggaagaagactat
tgccataccaaagtctttgtaaacgacatgtacagaacaccatggaagacatctattcca
acgttcaacatacaagaaacagactcaatattagatatgtggaaagcaaatgcctccact
gactttttggaaagaaaagaagaagctttggctatagttcctagttcaaatccttgttct
ccgacagatttggaggatgtgtgcttgatcactgaaagttgtgctgatgaagcgtcccat
acagacaaatattggaaaatcatcccatccgatgaaacagaatgttatttgttaccagaa
gaagctgtatttgtagactgtcttacacaatataggcaacatcttcctagcctgtccact
ttacaaaacaggctgaaaacaattcctgtggaagaccctctcccagactggaaagaaacc
cttccagatgaggaacttcttttcagaatggacacatttgtggagaaagacttagagcca
gacttcttgttggaagatttccatcccttgattcaaaatggagctgagcatttaagtctg
ccttatattgtggaaatggacgaagatgctacagcacggagattctctatttcagatctt
attacagttctgcagcttgcccctgaagatatgctagagacagtttcagaaggtttgctc
tcacaaatttcatccaaacaggaattaattgagcaaaacacaacagacagaaacattgat
ataccaaaatataaggacattgtggagaaagtctgttttagcttataccatgtggctgaa
ttggaggtcactttctctccaccacatcaggcctttaaagaaacagaaaaagaacaatcc
attaacctcgatgaagaagtcctgtcacctatttgttctacgtatcagtgtgtatatctt
ctttttatttacctaataattctattttatataagcttttacaatacaggtagacccgag
gacattttagaatacctagaaagtgatgctgcaattcagtttcctcttcttaaagatcca
tacattccagttgtattgccacactatacaatagatcaactgatagagcaaacatgtatt
gagactgaaaaattggtggatatgaccttggtagataattggtggaacaagtttgggcta
cctgataatcatgataccattatagagacattggattctgattctactactctcagcctg
gattcaaaaataatgtcggtaacaaagattacccctgatcagctggagcgaatattagaa
gaaaataatacatgtttccagcaggaagacaactttctgaaaactggcacacgggttaaa
gctcatagttcttctccacctcagataattgtgccatgccctcctatacacacacagggc
aatgttactctttccattgactcttgtggggcagataatactataatttcctataatgaa
gattgtcagctggataaatcaccatcttttccaaaaggtcataatgtaaagcagagtgca
ccatctacttctcacacactgtcacttggagatttttcagaagaacataagtggcaagat
attggcattaaaggacctggtgtactggaaaatgatgatgttgatcctcttgccagcttt
ataatccttagaactaaaagatcattagatcaatatgaagagaaacatacagacacttat
cctgagcaagtcagtgatgcagaaaaccgacaaacacaacagattggaagccatgattta
tcctctgacgcagttagtcaccaagagtttacagaaggtcctaaacaccaggcaataact
gttccttttacagcttcagaaagccagtgtcaagcttatcgagtccttcatgcagcagca
gttcccgttctaaacaaactcacagtccttggggtgtctgcatgtgctgagtggaagttt
gctacagtttgctttgactctactcgcttcctattatgtcagcaagaaagaaatgtcacc
aacagatgcaaaacaggacagaaaaagaacaaagacattataatattcaagaatgcatct
tttctacacatactggtgacactcagagatcttatactgatgtgtaccttagatgcagca
ctagaatatttgtgtaatgcaaaaaacatatacaaaagtgtgctggaatcttgtttaaat
gatgtttggagaaagctaaggatcattcagtatgtaaaggataaaacaaaagagacagac
cccaaaatcacagccctcttagagttgatagaggaggcatatacaaaacaaaaggagctc
aaaatacttattttaagtagaatggattcagaggcaataaaagaaaccataaataattat
atcgagaaaaccaaaggtctaaaagcaatcttcttgtgtcctgtaaatggaaatgcattt
ctggatccagaaaatgtgttagacagtttaagaaattattcatatgtcatagtaaataac
cagtatataggaagtaactttccatgggctcatttctcccttgtcattgaaaatgactgc
actgatgtctggctaaagctgtgtcaggatctaaatgtttcacacataaccctaaagagc
catctgccagatctttccgcaatggacacctcaacatacggtgaaaaagaatttctgcta
cacattcaaattccttatatttttctgtcatcagaagaccttacaatttacccagaaata
ttgaatctgcttgagtcaaggtataatatgacatttattgaaagagagtgcagtccatct
ctacagctatttggaaaggctagccgctgtgctttaatcactgtagatgagtccactgtc
atcatactgcagagtctggaaggactgatgcctgataagtcagctgagaacctgatcctt
aaacttgtggctctgtctttgcaatacagctgctgctggctcctcttttatgttaaagaa
agacttaactctgagtacaactttgcaggaactgcgttacatagtgttgttctagtctat
gcagctataactgcatatttgtcaaaatcagatgacttgcaaataaagacttttatatct
acaggaatagataacactggattgcttgttcggcgtattgcagaccacaccctcatgtta
agtgcaagtgacccctataagtggctggacaagtcgtggctatccatccttccaacagag
gaagaaagaggtttgcttttatttccaagtgttaatcctttagtggctcagcgtatgcta
agcaggggaccctcgttacaatggctactgtcagcaaataaagaccagctaggggaactt
tttcctgaaataccatcaaaagttataaagcatttcagtgatattacagctttgcacaag
ctgagcacatcagctgcatctcacagaccttttgaaatttcagtaccagctgctagagaa
gactgcattagccatgacaatattcaaatctccctttcagatattgataagcataactca
tgtaatgcattggacagctctaaaacaaagcttggtagcagtggattgctaaaaccagtt
gacataagggcttctaataatgtgagcaaatcaagccacctaagtgaggaagatgttcag
caaaactatcaagacagtgctatgagaaacaaccaaattgtaaaacagacacagctatca
tccaaattttcccctctgcagagttgtcaacatgcaaccaaaaccaagtcaatgagattt
agtcacaagtattattcagaagcaacatttctgagcttttcaaaacaacaaaacaggaca
gcacaagcacaaaatgtatctgaacaatattaccaacagtctacaaatgaactaccatca
cacaaatgttctccagatatgctttccagtgaagaggatggtattctttctcaacataac
tattatggcactcaaggcaagtcaaacttttcagtccatagagaacatatatttgcaaat
gaatcaggccaccaaaattcaacaaattcagtgtatagcaaaaataggctggaggatgta
atatgtctcagcaaggaaacaactgcagaaaatccatcagtctatctacagtgtggatca
gaggatatttacagtccctttcccttaattcccaataatgaacacctggatgatctaaca
ttttctgaaatagcaagtactggaaagagaaaatttacaataaataatgttacagcaaaa
gaaacaatagcaggaatacaactttctcaacaaaaaagaagaaagctgatatatgagaaa
gtccctggacggtgtgatggacaaactcgtctaaaatttttctaa
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integrated database retrieval system
