Pyxicephalus adspersus (African bullfrog): 140327431
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Entry
140327431 CDS
T11284
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pads00536
]
140327431 (COL25A1)
Glycosaminoglycan binding proteins [BR:
pads00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140327431 (COL25A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
140327431
NCBI-ProteinID:
XP_072262918
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All DBs
Position
3:complement(92522025..92772766)
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AA seq
616 aa
AA seq
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MLLKGQAAQKVGTNLQRCDGDKAGDRWTSCGRTLPSALALLLSLMSLASCLYLNVRSNHL
QDRMWAIEHGKAGDILHVAGLSVDQLNSIVQEKVDRLLSQRSYEHMAKIRISREVPADCN
CPAGPPGQRGKRGRRGEPGPPGPAGPKGDKGDQGDQGPRMVFPKINHGFLSADQQLIKRR
LIKGDQGAPGLDGIQGMKGDQGEPGDKGDMGESGPKGETGEKGDPGSSAAGIKGEPGESG
RPGQKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGERGELGPPGRGERGLPGA
PGTKGEPGESGSRGPKGSKGESGSRGDAGPIGPRGPPGQKGDQGATEIIDYNGNIQEALQ
RITAITVTGPPGPPGPPGLPGPKGEGGPIGPPGVDGEQGPKGSKGDRGELGIAGEKGGIG
LPGLPGANGLKGEKGDHGAPGPHGASIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGL
KGLRGEPGQKGDRGPLGLPGASGLDGKPGPRGTDGPLGPPGPAGPKGDRGEKGAVGDPGP
RGPYGLPGKDGEPGLDGFPGPRGEKGDPGERGEKGEKGKKGKKGPKGEKGEQGAPGLDAP
CPLGPDGLPMPGCWQK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaaaggacaagctgcccagaaagtgggcactaacctgcagaggtgtgatggg
gacaaggctggggataggtggacaagctgtggaaggactttgcccagtgctttggcattg
cttctgtcactgatgtccctagcatcctgcctgtacctgaatgtcaggagcaaccatctg
caggacaggatgtgggctatagagcatggcaaggctggggacatcctccatgtggctgga
ttatctgtggatcaactcaactccatagtgcaagagaaggtggaccgacttctgtcccag
aggtcatatgagcacatggcaaaaatacgaatctcaagagaagtgccggcagactgcaac
tgcccagcaggccctccaggacaaagaggcaaaagaggtagaagaggcgaacctggtcct
cctggtcctgctggccccaaaggtgacaagggagatcaaggtgatcagggccctcggatg
gtgtttcctaagatcaatcatggctttctttctgctgatcagcagctcattaaacgccgc
ctcattaagggagatcaaggtgctcctggattggatggcatacaggggatgaagggtgat
caaggagaacctggtgacaagggtgatatgggtgaatctggtcctaaaggtgaaacagga
gaaaagggggatccagggtcttcagctgctggcatcaagggggagcctggagaatcaggt
cgtcctgggcaaaagggtgaaccagggcttcctgggctacctggacttcctggaataaag
ggggaaccaggatttttggggccccagggagaacctggcctaccaggcctgccaggaaca
aagggtgaacgtggagagcttggtcctccagggagaggggaaagaggtcttccaggagct
ccaggaacaaaaggagaaccaggtgaatctggctctagaggcccaaaagggtccaagggt
gaatctgggagcagaggtgatgctggtccaattggtcctagaggacctccaggacaaaag
ggagatcaaggtgcaacagaaattatagattacaatggaaacattcaggaagcattgcag
aggattaccgccattacagttacgggacctcctggaccacctgggccacctggtttgcct
ggaccaaagggagagggaggtcctattggtcctccaggagttgatggggagcagggccca
aaaggttccaaaggagatcgtggagagcttggtatagcgggagagaagggaggaattggc
ctccctggattaccaggtgcaaatgggctcaaaggagaaaaaggagatcatggtgcaccg
gggcctcatggagcttctatcattggccctcctggcccaccagggcctcatggtccccca
ggtccaatgggaccacatggattgccaggtccaaagggtgaaccagggttaaatggtctt
aaaggattgaggggtgagccaggtcaaaagggtgacagaggaccactgggtcttccagga
gcatctggcttagacggaaagccaggacccaggggaacggatggtccacttggccctcct
ggtccagcaggtccaaaaggagaccggggtgaaaagggagctgttggtgatccaggacct
agaggaccatatggtttacctggcaaagacggagaaccaggtctagatggttttccaggt
cctcgaggagagaaaggtgacccaggagaaaggggagaaaagggggaaaagggaaagaag
ggcaaaaaagggcctaaaggggaaaaaggagaacagggtgcccctggattagatgcacct
tgcccgttgggaccagatggccttcctatgcctggctgttggcaaaagtga
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