Pyxicephalus adspersus (African bullfrog): 140328138
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Entry
140328138 CDS
T11284
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pads03400
]
140328138 (GEN1)
DNA repair and recombination proteins [BR:
pads03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
140328138 (GEN1)
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
140328138
NCBI-ProteinID:
XP_072263606
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All DBs
Position
4:complement(18081017..18103321)
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AA seq
920 aa
AA seq
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MGVHELWPVLEPVKKHVALQSLSGKTLAVDLSIWVCEAQSVKQMIGVVSKPHLRNLFFRV
SSLNLMGVKLVFVTEGEAPKLKADTMNKRNAMRYGPSNKPAPSRPGRSYFKSVLKECLRM
LDCLGVPWVQAAGEAEAMCAYLNAKGYVDGCITNDGDVFLYGAQTVYRNFTMNVKDPHVD
CYKASAIKDKLGLDRESLVALAILLGCDYVPKGLPGVGKEMALKFIRSLNGESVLQRFYQ
WRKQFDDSTVPTKSAKKTTHCSVCCHPGSAKEHQRKGCTLCGSDRYCEPHDYDYCCPCEW
HKAEQEKKNNPLEYTLKTKAKKREGFPYHEVIEEFLVNKDKLSKVIRWARPSLPCFQNFA
LEWMEWPKHYACEKILVLLTYYDMHERKAGRQHDAQLQATRIVKTRVRNGVPCFEIEWVK
PGCYVFPDDHPPDAPLLTIEEESLFTAAYPHIVESFQKDKIEAELLKQKSKKNKPTSKVL
PNVDDVASLLSEMSLTLGAEKSPPSQEGVSSVDNDPIPTTSLQSLPDPQAIFLSESSKLP
SALLPQETDLSVSTSSLVKKEDTEILHNPCSSPAISSRQESLVSSPNISSLISDLNLSNI
DWEATSFSRSPQVESHTASNEGHGSEDKATFPEPRIHALANTKQELVTPSKLKDTADQNP
ALAVDSPYISHLEKLPLRERILLKNATQTVNLNKDCRPPNLNDKKFPLAPVSKTLDKQKL
TKLNFSDKSKDFKENMQIQPKLIKPPSPQKSKAHNNVVTKLTGTSNSSQVLQLPTTKSFS
FVKKSILAPMSNIPDCSNVATKPETNPLPKKSVCQKIMLSSDDEDEQVKDGKSKHVAKSI
TRGTKNMIPQSKMASTTPAFTCLSSDDQSSDKEDIFLSPKSKSSAKAQEDEDDDCDDSII
SIDSPLPLSERLKLRLQQNS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccatgaattatggccagtcctggagccagtaaagaaacatgttgcgcttcag
agcctcagcgggaagactcttgcagtggatctgagtatttgggtctgtgaagctcaatct
gtaaagcaaatgattggagttgtttccaaacctcatctcaggaatctctttttccgtgtc
tcctccttgaatttaatgggagtgaaacttgtttttgtgacagaaggggaagccccaaag
cttaaagctgacacaatgaacaagaggaacgcaatgagatacggcccatccaacaagcca
gctccatctaggcctggacgctcctatttcaagtctgtcctgaaggagtgtcttcgcatg
ttggactgtctgggtgtcccttgggttcaagcagcaggggaagctgaagcaatgtgtgct
tatctcaatgccaagggctatgtagatggatgtattaccaacgatggcgatgtattcctc
tatggagcacagactgtgtatagaaatttcaccatgaatgtcaaggacccacatgtggat
tgttataaagcatctgccattaaggataaactgggtttggacagggagtcactggttgct
cttgcaatcctcctgggttgtgattatgttcccaaaggcttgccaggtgttggaaaagaa
atggcactgaagttcatcaggtctttgaatggagagagtgtgttacagagattttaccag
tggaggaagcagtttgatgattccacggttcctactaaatctgccaagaagacgactcac
tgttctgtgtgctgtcatccaggttcagctaaagaacaccagcggaaaggatgcactctg
tgcggcagtgatcgatactgcgagccacatgactatgattactgttgtccatgtgagtgg
cataaggctgagcaggaaaaaaagaacaaccccttggaatataccctaaagacgaaggca
aaaaagcgggaaggctttccttatcatgaggttattgaggagtttcttgtcaacaaggac
aagttatcaaaggtgatccgatgggcccggcccagtctgccatgtttccagaattttgct
cttgagtggatggagtggcccaagcattatgcatgtgagaagattttggttcttctgaca
tattatgacatgcacgagaggaaggcgggaaggcagcacgatgcacaacttcaggcaacc
cgaattgtaaagacacgagtcaggaatggggttccatgcttcgaaattgaatgggtaaag
ccaggctgctatgtttttcctgacgatcatccaccagatgctccattactgaccatagaa
gaagaatccctattcacagcagcctacccccatattgtggagtcattccaaaaagacaaa
atagaggctgagcttttaaaacagaaaagcaagaaaaacaagccaacttccaaggtcctt
cctaatgtggatgatgttgcttctcttttatctgaaatgagcttaactctaggggcagaa
aagtctccaccttcacaagaaggagtctcgagtgttgacaatgatcccatacccaccacc
agtcttcaaagtcttcctgacccacaggccatattcctctcagaatcatctaagctgcct
tcggccttgttacctcaagagacagacctaagtgtttcaacatcatctttagtcaagaag
gaggacacagaaattcttcataatccatgttcttcaccagcaataagtagtagacaagaa
tcactagtgtcatcacccaatatctcatctctgatttccgacttaaatttgagtaacatt
gactgggaagccacctcatttagtaggtctcctcaggtggaatctcacacagcatctaat
gagggccatggttctgaagacaaggcaacttttcctgaaccaaggattcatgccttggct
aataccaaacaagaattggttacaccaagtaagctcaaggatacagctgaccaaaatcct
gctttggctgtagattctccttatatttcccatcttgaaaaattaccattaagagagaga
atactgttaaagaatgctacacagactgttaacctcaataaagactgtagaccaccaaac
ctcaacgataagaagtttcctttggctcctgtttccaaaacccttgataaacagaagttg
acaaaactaaatttcagcgacaaatccaaagattttaaggaaaatatgcaaattcaaccc
aagttaataaaaccaccaagtcctcaaaaaagtaaagctcacaataatgtggtcacaaaa
ttgactggaactagcaacagctctcaggtacttcagctccccaccacaaaatcattctcc
tttgtgaagaagtccattcttgctccaatgagtaatataccagactgtagcaacgttgca
actaaacctgagacaaaccctttgccaaagaaaagtgtctgccaaaagattatgttgtcc
agtgacgatgaggatgagcaagttaaagatggcaaaagtaaacatgtagcaaagagcata
acgaggggcactaaaaatatgatccctcaaagcaaaatggcttccaccacaccagcgttc
acctgtctgtccagcgatgatcaaagctctgataaagaagatatttttctcagtccgaag
tccaagtcttcagcaaaggcccaggaagatgaggatgatgattgtgacgattctatcatt
tctatagatagcccgttgcctctgtctgaaagactaaaactgagattgcagcagaacagt
taa
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