Pyxicephalus adspersus (African bullfrog): 140328144
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Entry
140328144 CDS
T11284
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pads03041
]
140328144 (DDX1)
03016 Transfer RNA biogenesis [BR:
pads03016
]
140328144 (DDX1)
Enzymes [BR:
pads01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140328144 (DDX1)
Spliceosome [BR:
pads03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
140328144 (DDX1)
Transfer RNA biogenesis [BR:
pads03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
140328144 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
140328144
NCBI-ProteinID:
XP_072263618
LinkDB
All DBs
Position
4:complement(19123173..19145476)
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMQEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKASVKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRSTRGVSKGKYYYEVSCHDQGLCRVGWSTLQASLDLGTDKFGFGFGGTGKKSHCKQFD
NYGEEFTMHDTIGCYLDVDGGCLKFSKNGKDLGHAFDIPSHLKNQAFFASCVLKNAELKF
NFGEEDFKFPPKDGFVALCKASDGHVVKSQHAGSAQVSQTKNMPNAPKALIIEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAAKEQLAILESGVDIVVGTPGRIDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHQQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKKDKLWERLGNKHIRTDGVHERDNTRPGGT
SAETMSEAIKILKGEYTVRAIKEHNMDQAIIFCRTKLDCDNMEQYFIQYGGGPDRKGHQF
SCVCLHSDRKPQERKQNLERFKKSEVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAVSLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLTCTISHVEPDMKVPLDEFDGKVVYGQRRATGGGLYKGHVEILAPTVQELASLEK
EAQTSFLHLGYLPNQLFRSF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcggaaatgggtgtgatgcaggagattgctcaggccgtggaggagatg
gactggctccttcctactgacattcaggcagagtctattccactgattctgggtggaggt
gatgtacttatggctgcagaaactggaagtggtaagactggggctttcagcatccctgtg
attcagattgtatatgaaaccttgaaagatcagcaggaaggcaagaaaggaaaggcttct
gttaagaccggcggtgcagttctgaataagtggcagatgaacccatatgacagaggctct
gcctttgccattggttctgacggactttgttgtcagagcagagagataaaggagtggcat
ggatgcaggtcaacacgtggagtcagcaaaggaaagtattactatgaggtttcctgccat
gaccagggtttgtgtcgagttggttggtctacacttcaggcatcgttagatcttggaaca
gacaaatttggctttgggtttggaggaactggaaagaagtctcactgcaagcagtttgat
aattatggggaggaatttacaatgcatgataccattggttgctacctggatgtggatggc
ggctgtttaaagttctcaaagaacggtaaagaccttgggcatgcatttgatattccctca
cacttgaagaaccaggcattttttgcatcgtgtgttctaaagaatgctgaactgaagttt
aattttggagaagaggacttcaaattcccacctaaggatgggtttgttgctttgtgcaaa
gcttcagatggacacgtagtcaaatctcaacatgcaggaagtgcccaagtgagtcagaca
aagaatatgcctaatgcaccaaaagccctgattattgaaccatcccgggagctggcagag
cagactctgaataatgtcaaacagttcaagaaatatgtggacaatccaaagctaagggaa
ctcctgataattggtggagtagcagccaaggagcaactggcaatactggagagtggggtg
gacattgtagtcggcactccaggcagaatcgatgatctagtttcaacagggaaactgaat
ctttcacaagtgcgcttcctggtgcttgatgaagctgatggcctcctctcccagggttat
tcagacttcatcaatagaattcatcaacaaatccctcaaatcacttctgatgggaaaagg
ctgcaggtgattgtttgttcagccaccctgcattcattcgatgtgaagaagctgtctgag
aaaatcatgcactttcccacctgggtggatctgaaaggagaagattctgtccctgaaact
gttcaccatgttgtagtcccagtcaaccctaagaaagataaactgtgggagcgactgggc
aacaaacatatccgtactgatggtgtccatgagagagataacaccagacctggaggaacc
tctgcagaaaccatgtcagaagctattaagatcctgaagggagagtacacagtccgtgcc
atcaaagaacacaacatggaccaagccatcattttttgcaggaccaagttggactgtgac
aacatggagcaatattttatacaatatggaggagggcctgacagaaagggacaccagttc
tcatgtgtgtgtttacacagtgatagaaaaccacaggagagaaagcaaaacctggagaga
tttaagaaaagtgaagttcgattcctgatctgcacagatgtggccgccagaggtattgat
atccacggagtcccctatgttatcaatgtgactcttccggatgagaagcagaactatgtc
catcgtattgggagagttggcagagctgagagaatgggattggctgtttctctggtggca
actgaaaaagagaaggtttggtatcatgtgtgcagcagtcgtgggaaaggttgttataat
accagactaaaggaagatggcggctgtaccatatggtacaatgagatgcagcttctgtct
gaaattgaggagcacttgacttgcactatatcacatgtagaacctgatatgaaggtgcct
ctggatgaatttgatggaaaagtagtctatggacaaagaagagccactggtggtggactc
tataaaggacatgtggagatcttggccccgactgtacaggagctggcatctttggagaaa
gaggctcagacctctttcttacaccttggctatctgcccaaccaactcttcagatccttc
taa
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