Pyxicephalus adspersus (African bullfrog): 140328289
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Entry
140328289 CDS
T11284
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04136
Autophagy - other
pads04140
Autophagy - animal
pads04145
Phagocytosis
pads04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
140328289 (ATG16L1)
04140 Autophagy - animal
140328289 (ATG16L1)
04136 Autophagy - other
140328289 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
140328289 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pads04131
]
140328289 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
pads03029
]
140328289 (ATG16L1)
Membrane trafficking [BR:
pads04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
140328289 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
140328289 (ATG16L1)
Mitochondrial biogenesis [BR:
pads03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
140328289 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
eIF2A
Beta-prop_VPS8
Beta-prop_WDR19_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
PAC11
CFAP251_N
Beta-prop_HPS5
Beta-prop_DCAF12
Tricorn_2nd
Ge1_WD40
Beta-prop_NWD2_C
CCDC93_CC
Beta-prop_SPT8
ASA1
HEF_HK
ANGPTL8
Peptidase_M15_4
DUF1664
Mce4_CUP1
TcaA_2nd
Vac17
CLIP1
Allexi_40kDa
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
140328289
NCBI-ProteinID:
XP_072263865
LinkDB
All DBs
Position
4:complement(32929998..32954391)
Genome browser
AA seq
631 aa
AA seq
DB search
MTTSMKTSRYPGWKIHIATELRIRDREQRQAFEELILQYNRLLEKSDLQSVLAEKLQAEK
YDLQSRHDTSPGPDGLRHEAILQDMARMRIKHQEELTELHKKRGELAQTVIELNNQMHQK
DKEIQTNKETIEEYIQTINSLETECQDLRNKLQELERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSKRRQARLQKELADAAKEPLSVEQDDDI
EVLNDNADVPGDAAAAPPVGRTSSKRLSQPGVGGLLDSITNIFGFKDQEPFWSLSESPLL
GHHSDTARRRSIASFPSSQDCIDAQAGGNREVRVPVSALHSFDAHDGEVNAVRFSPGSRL
LATGGMDRRVKLWEVIGDKCEAKGSLTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD
DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRNKVCIKTVFAGSSCNDIV
CTEQCVMSGHFDKKIRFWDIRTESIVRELELQGRITALDLNPERTELLSCSRDDLIKVID
LRANAVRQTFSAQGFKCGSDWTRVIFSPDGSYVAAGSAEGTLYFWNVMTGKVEKILGKHH
SSSINAVAWSPSGTYVVSVDKGSKGVLWSDF
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgactaccagtatgaagacaagcagataccccggctggaagatccacattgccaccgaa
ctgaggataagagatcgggaacaacggcaagccttcgaggagctcatcctacaatataac
aggttgcttgaaaaatctgaccttcagtctgttttggccgaaaaactacaggcagagaag
tatgatctacaaagtcgacatgacaccagcccaggtccagatgggttgcgtcatgaagcg
atactacaggatatggctcggatgaggataaaacaccaggaggagctgactgaactccat
aaaaagcgtggggagctggctcagacggttatagaactaaacaaccagatgcatcagaag
gacaaagagatccagactaacaaggagacgatagaggaatatatccagaccattaactct
ctagagacagagtgccaagacttacggaataaactgcaagaactggaacgagccaatcag
accttgaaagacgagtacgacgccctgcaaataacatttaccgctttggaagaaaaactg
cggaaaactacagaggataaccaggagctggtgacccgttggatggccgaaaaagctcag
gaagccaatcgtctcaatgctgaaaatgagaaagactcaaagaggagacaggcacgactt
cagaaggaactggctgatgctgcgaaggaacctctatctgttgagcaagatgatgatata
gaggtgttaaatgataatgctgatgtcccaggggatgctgcagcagcaccaccagttggg
cgaacctccagtaagagactctctcagcctggcgtaggaggccttctggattctatcact
aatatcttcggctttaaggatcaggaacccttttggagcctgtctgagtctcccctcttg
ggtcatcattctgacactgccaggagaaggtctatagcctcgtttccctcttcccaggat
tgtatagatgctcaggctggaggtaatcgggaagtaagagttccagtttctgctctccac
tcatttgatgctcatgatggagaagttaatgctgtgcggtttagcccaggctcacggtta
ttggcgacaggaggaatggacaggcgggttaaactgtgggaggttattggagataaatgt
gaggcaaagggttcgctaacagggagcaatgccggaattactagtatagagtttgacagt
gctggctcctacctattggctgcatccaatgattttgccagcagaatctggactgtagat
gattaccggcttcggcacaccttaacgggacatagcgggaaggtcttatctgccaaattc
ttactagataacgctcgaattgtgtctggtagtcacgatcggactttaaaactctgggac
ctgcgcaataaagtctgcattaagactgtttttgctggatccagttgtaatgacatagtc
tgtacagagcaatgtgtgatgagcggtcactttgacaaaaagatccgattctgggatata
agaacagagagtatagtacgggagctggagcttcaaggaagaatcactgcgttagatctg
aaccctgaaagaacagagctgctaagctgctcgcgggatgacctcatcaaagtcattgac
ttgcgtgccaatgcagtgcgccagacttttagtgctcagggtttcaagtgtggatcagac
tggactagagtaatttttagtccggatgggagctatgtagctgctggatcagcagaggga
acattatacttctggaatgtgatgactgggaaggtagagaagatccttggaaagcatcat
agttcatccataaatgctgttgcttggtctccctctggcacctatgttgttagtgtggat
aaaggaagtaaaggagttttatggtctgacttttga
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