Pyxicephalus adspersus (African bullfrog): 140328312
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Entry
140328312 CDS
T11284
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04136
Autophagy - other
pads04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140328312 (ATG4B)
04136 Autophagy - other
140328312 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pads01002
]
140328312 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pads04131
]
140328312 (ATG4B)
03029 Mitochondrial biogenesis [BR:
pads03029
]
140328312 (ATG4B)
Peptidases and inhibitors [BR:
pads01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
140328312 (ATG4B)
Membrane trafficking [BR:
pads04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
140328312 (ATG4B)
Mitochondrial biogenesis [BR:
pads03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
140328312 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
140328312
NCBI-ProteinID:
XP_072263916
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All DBs
Position
4:complement(33865584..33880041)
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AA seq
380 aa
AA seq
DB search
MDAATLTYDTLRFSDTPDFPETAEPVWILGKNYSALTEKEEILNDVTSRLWFTYRRNFPP
IGGTGPTSDTGWGCMLRCGQMIFAQAVMCRHVGRDWRWNKQKPQGEYLSILTAFLDKKDS
YYSIHQIAQMGVGEGKYIGQWYGPNTVAQVLRKLAAFDRWSMIAVHIAMDNTVVTEEIRR
LCRTESCETGPLCNGHAGASDSDIQWKPLVLLIPLRLGLSEINEAYIETLKHCFMLPQSL
GVIGGRPNSAYYFIGYVGDELIYLDPHTTQLSVEPSDSGDIIDESFHCQHPPCRMHVSEI
DPSIAVGFFCKSEEDFNDWCQRIRKLYHSSGALPMFEVVDHLPLHLSNPDVLNLTPDSSD
ADRLDRFFDSEDEEFEILSF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagcaaccctcacctatgacacactccgtttctcggatacacccgactttcca
gaaactgcagagccagtttggatattggggaagaattacagtgcattgacagaaaaggag
gagattctgaatgatgtcacatcgagactgtggtttacatatcggagaaactttccacca
ataggaggaacaggaccaacctctgacactggctggggctgtatgttacgctgtggacag
atgatatttgctcaggctgtaatgtgtaggcatgtgggaagagattggagatggaacaaa
cagaaaccacagggggaatacctcagtatcctgactgcttttctagacaagaaagatagt
tactattccattcatcagattgctcaaatgggagtgggtgaaggaaagtacatcggacag
tggtatggtccaaacacagtggcacaggtcttaagaaagcttgctgcttttgatcggtgg
agtatgatagctgttcacattgctatggataacacagttgtcacagaggaaataaggcgg
ttgtgtagaacagagagctgtgagactggaccgctgtgtaatggtcacgctggagcctca
gactcggatatacaatggaagcctcttgttttactcatacctctcaggctgggtctgagt
gagatcaatgaagcttatattgaaaccctgaagcactgcttcatgttaccacagtcatta
ggtgttattggtggtcgacccaatagtgcttactacttcataggatatgtgggggatgag
ttgatttacttggatcctcacactacacaactgtctgtggagcccagtgacagtggtgat
ataatagacgaaagcttccactgccagcaccctccttgtcgaatgcatgtgtctgagatt
gacccctctattgcagtggggttcttctgcaaatctgaggaggatttcaatgattggtgt
caacgcattagaaagttataccattctagtggagccttacctatgtttgaggtggtggat
cacttgcctcttcatttatctaatccagatgtacttaaccttacaccagattcctcagat
gctgatcgccttgacaggttcttcgattctgaagatgaagaatttgaaattttatctttt
taa
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