Pyxicephalus adspersus (African bullfrog): 140328388
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Entry
140328388 CDS
T11284
Symbol
RNF13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pads04121
]
140328388 (RNF13)
Enzymes [BR:
pads01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140328388 (RNF13)
Ubiquitin system [BR:
pads04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140328388 (RNF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf_RING_Vps8_fungal
DUF7027
DUF7313
FeoB_associated
Prok-RING_4
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
140328388
NCBI-ProteinID:
XP_072264036
LinkDB
All DBs
Position
4:41305054..41353630
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AA seq
398 aa
AA seq
DB search
MSALSLELRSWHMELLVIMEALMKNVCSLRSISLWTVHIFAAVCLLPVEADIIAYASDND
TRTFEDLPARFGYRLPSDGLKGFLVSSKPENACEPISPPPVQKDNSSSIYVVLIRRLDCN
FDVKVLNAQRAGYKAAIVYNVDSDELISMGSNDVEILKKIDIPSVFIGESSAHILQEGFT
WDKGAHLLLVPEATMPLEYYLIPFLIIVGICLVLIVIFMITKFVQDRHRARRNRLGKDQL
KKLPIHKFKKGDVYDVCAVCLDEYEEGDKLRVLPCSHAYHCKCVDPWLTKTKKTCPVCKQ
KVVPSHGDSDSDSDSSQEDNDVSENTPLLRPTPSASAQSFGAIAHSQSQQSIVESSEEDD
DDDDADDSDSSDEECNTQSVVVQLQHNMEQESRERNTV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcactatcactggagctgcggtcctggcacatggagttgctggttataatggag
gctctaatgaagaacgtttgctctttgagaagcatcagcctttggacagtccacatcttt
gctgccgtttgcctgctccctgtagaagctgacattatagcatatgcttcagacaatgac
acccgaacatttgaagaccttcctgcaaggtttggctacagacttcccagtgatggttta
aagggatttctggtatcctctaaaccagagaatgcttgtgagcctatttctcctccgcca
gtgcagaaggacaacagctctagcatctatgtggtgcttatcagaaggctagactgtaac
tttgatgttaaggtattgaacgctcagagagctgggtacaaggctgctattgtgtacaat
gtggactccgatgaacttatcagcatggggtccaatgatgttgaaattctgaagaaaatt
gacattccgtcagtgttcatcggagagtcttctgcgcacattctgcaggaaggattcacc
tgggataaaggagcacatcttttgttggttcctgaagccaccatgccactggaatactac
ttaataccattcctaatcatagtcgggatttgtctggtgctcattgtcatttttatgatt
accaagtttgtgcaggatcggcacagggcacggaggaacagactgggcaaggatcaacta
aaaaaacttcccatacataaatttaaaaaaggtgatgtttatgatgtgtgtgctgtctgc
ctggatgaatatgaagaaggggataagctacgagtattgccctgctctcatgcctatcac
tgcaagtgtgtggatccatggttaacaaagaccaagaagacctgtcctgtttgcaaacag
aaggttgtcccatcccatggggactctgattctgattcagacagcagccaggaagataat
gatgtctcagaaaatactccattactcagacccacaccttctgccagtgcccagtcattt
ggggccatagcccattctcaatcacaacagagcatagtggagtcctctgaagaggatgat
gatgacgatgatgcagatgacagtgacagcagtgacgaggaatgtaatacacaaagtgtt
gtagttcagctgcagcacaacatggagcaggagtccagagaaaggaacacagtatga
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