Pyxicephalus adspersus (African bullfrog): 140328717
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Entry
140328717 CDS
T11284
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140328717 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pads04131
]
140328717 (RIMS1)
Membrane trafficking [BR:
pads04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
140328717 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
140328717 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
140328717
NCBI-ProteinID:
XP_072264613
LinkDB
All DBs
Position
4:67638425..67820545
Genome browser
AA seq
1556 aa
AA seq
DB search
MSSSMGPRGPRPPIVPPPMPDLPDLSHLTEDERNTIMAVMNRQKEEEEKEEAMLKRLHQQ
FESYKEQIRKIGEDTRRYPGDHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGTQEPASQDGTLSDTGTGPGSDAPR
EKKAKLQERSRSQTPLSTAATAGSQDTSEPSLQSDRNNGSEPSLPAAVQDQKSSRSRSEP
PRDRKKTVAVSEQNGKVLKGERKRVQKSNQQGQAYPDEHKERRETRKLGKGRSQDIPEKL
EEGANTEDDQQRLDDDYQTRYRSDPNLARYPVKPQPEEQQMRIHAKVSKARHERRHSDAS
LPHAELDEAEVPENKLGKNSQVPGNQDKRTVLESQQSYSIDRNGDGPISKSKQVSNHSPP
SPRHSPVPPEHVDSKNHDSFKKQSRLDPSSALLMRKANREKMETMSRNDSLSSDQSESVR
PSPPKPHRSKRGGKRRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKAAVFGRRQLEC
PVSPQSCCGDLDYYWLDPATWHTRDTSPLGSHPVTWQPSKEGDRLIGRVILNKRTSMPKE
SGALLGLKVVGGKMTETGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNED
VYNIILQSKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMDRPSISVISPTS
PGALKDAPQVLPGQLSVKLLYDKVEHHLIVTVLQAIDLPPRPDGRPRNPYVKMYFLPDRS
DKSKRRTKTVKRSSEPKWNQTFVYSHVHRKNFRERMLEITVWDQPRVQEEESEFLGEILI
ELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHVHGENSSKKLQRSQRIIDSDFSD
FDVDDGIGVVPPGSRSNARQSRSTTLTVPEQQRVTHHRSRSVSPHRLDDQGRTRSRLPNV
PLQRSLDEIHQMRRSRSPTRHHDASRSPVTHRSRDSDNQYLSDQDSELLMLPRAKRGRSA
ECLHTIRNTVRHSKTLPPKMPLLEFGSNWRLYSELQPSLDRARSASTNCLRPDTSLHSPE
RERQPRKLERSSNQKQNRKSMVSEVERNHQLGSQSSTGDSSFNRRGRQLPQVPVRSNSVE
QEPDRYSSSSTANLLVEERARQIKLKVQRYKQTAGSSSSQELEREQYSKYNMHKDQYRSC
DNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPSRRIWMQGRRMGSSGRTITK
STSVSGEIYKLEHNDGSQSDTAVGTVGICGKKRRPSLSAKVVAIVSRRSRSTSQLSQTDS
SNKKFKSTIQRSTETGMAAEMRSRMVRQPSRESTDGSINSYSSEGNLIFPGVRLGVDSQF
SDFLDGLGPAQLVGRQTLATPAMGDIQIGMVDKKGQLEVEVIRARGLIQKPGSKSTPAPY
VKVYVLENGACIAKKKTRIARKTLDPLYQQTLVFEENPHGKVLQVIVWGDYGRMDHKSFM
GVAQILLEELDLSSVVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPSIRS
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcaatggggcccaggggccctcggccacccatagtgcctccccccatgccc
gatctccccgatctgagccatctgacagaggacgagaggaacacgatcatggcagtgatg
aaccgacagaaggaggaggaggaaaaggaagaggccatgctgaagaggctacatcagcaa
tttgagagctacaaagaacaaatcagaaaaataggggaggacacacgtcggtatcctggg
gatcacaaggatgacgctccaacgtgtggtatctgccacaaaacaaagtttgcagatggc
tgcggacatttatgctcttactgccgaacaaaattttgtgcccgatgtggaggtcgtgtt
tcgcttcggtcaaacaatgaggacaaagtggttatgtgggtttgcaatctgtgccgaaaa
caacaagaaattcttacaaaatcaggtgcatggttttttggaagtgggacacaggagcca
gcaagccaagatggaacactaagtgatactggtacaggtcctggctctgatgcgccaaga
gaaaagaaagcaaaacttcaagagagatctagatctcaaactcctctaagtactgctgca
acagcaggttcccaagacacctcagaacctagtttacaatctgataggaacaacggttca
gaaccatcactaccagctgcagttcaagatcagaaatcttcaaggtcaagaagtgaacca
ccaagagacaggaagaagactgtagcagtatcagaacagaatggaaaagtcctaaaaggg
gaacgcaagagagtccagaaatcaaaccaacaaggtcaggcgtatcctgatgaacacaaa
gaaaggagagagacaagaaaattgggaaaaggaagatctcaagacattccagaaaaactg
gaggaaggagcaaatacagaggatgatcaacaaaggctggatgatgactatcaaactcgg
tataggagtgaccctaacttagccagatatcctgtaaaaccacagccagaagagcaacaa
atgcgtatacatgccaaggtttcaaaggcacggcatgaaaggagacacagtgatgcttcc
ctaccccatgcagaactggatgaagcagaagttcctgagaacaaactaggaaaaaactca
caagtgccaggaaaccaagataaaagaaccgttttggaaagtcagcagtcatattcaata
gatagaaatggcgatggaccaatttcaaagtccaaacaagtatccaatcacagccctcca
agtcccagacacagtcctgtacccccagaacatgtagattccaaaaaccatgattccttt
aagaaacaaagtcggttagaccccagctcagctctattaatgagaaaagcaaaccgtgaa
aagatggagaccatgtcaaggaatgattcacttagttcagatcaatctgaatctgttagg
ccatccccaccaaaacctcatcgatctaaaagaggtggaaaaaggagacaaatgtctgta
agtagctcagaagaagaaggggcatcaacacctgaatacaccagctgtgaagatgtggaa
atagaaagtgaaagtgtcagtgaaaaagctgctgtgtttggcagaagacagttggagtgt
cctgtgtccccccaatcatgctgtggtgacttggactactactggttagaccctgccaca
tggcacactagagacacatccccccttggctcgcatcctgttacctggcagccttcaaag
gagggagatcgtttaattggacgtgttattcttaataagagaacaagtatgccgaaggaa
tcaggggcacttctgggactgaaagtagttggaggtaaaatgactgaaacaggacgtctt
ggtgccttcatcaccaaagtcaagaaaggtagccttgcagatgtcgtaggccatttaaga
gcaggtgacgaggttttagaatggaatgggaaacctttacctggtgcaacaaatgaagat
gtttacaatatcatcttacaatcaaaatctgaaccacaagtagagatcattgtgtcccgc
cccattggtgacattccaaggatcccagaaagctctcatcctccgttagaatctagttca
agttcttttgaatctcagaagatggacaggccttcaatatctgttatatccccaaccagc
cctggagcacttaaagatgcacctcaggtcttgccagggcagctgtctgtaaaattgttg
tacgataaagtagaacatcatctaatagtcactgtgttgcaagcaatagaccttccaccc
aggccagatggacgcccaagaaatccctatgtaaaaatgtatttccttccggacagaagt
gataaaagtaagcggaggaccaaaacagtgaagaggagctcagaaccaaaatggaaccaa
acttttgtttattcccatgtgcatcgtaaaaattttagagaaagaatgttagaaattacc
gtgtgggatcagcctagagtacaagaagaagaaagtgaatttcttggcgagattctcata
gagctagagaccgcactattagacgatgaacctcactggtataaactgcaaacacatgat
gagtcttcactacctctgcctcagccatcacctttcatgccaaggagacatgtacatggg
gagaattctagcaaaaaattacaaagatctcagcgaatcattgatagtgacttctcagat
tttgatgttgatgatggtattggagttgtgcctccaggttcaaggtctaatgcgagacaa
agcagatccacaacattaacagtgccagaacaacaaagagttactcatcaccgctcacgt
tccgtatctcctcaccgtcttgatgatcagggcaggacccgctcacgtttaccaaatgtg
ccattacagaggagtctggatgaaattcatcaaatgagacgatcacgttctccaacaaga
caccatgatgcctcccgcagtccagttactcacaggtccagggactcggataatcagtat
ttatctgatcaagatagtgagcttcttatgctgcccagggcaaaacgtggccgaagtgca
gagtgcctacatactatcagaaatactgttaggcacagtaaaactttgccacccaagatg
cctttgctagagtttggttctaattggagattgtacagtgaactacagccctcccttgac
agggctcgaagtgctagtaccaactgtttgaggccagatactagtttgcattcaccagaa
cgagaaaggcagcccagaaaattggaaagatctagcaaccaaaaacagaacagaaaaagc
atggtttctgaagtagaaagaaaccatcaactaggaagccaatcatccacgggggattct
tcattcaatcgaagaggaaggcagcttccacaggtccctgtaagaagcaacagtgtagaa
caagaaccagatcgttatagttcatcgtcaacagcaaatttattagtggaagaacgagca
agacaaatcaaattaaaggttcagcggtataagcaaacagctgggtccagttccagtcaa
gaattagagcgagagcaatattctaagtataacatgcataaagatcaatacagaagttgt
gacaacgtctcagccaaatcatcagatagtgatgtcagtgacgtgtcagccatttcccgt
accagtagtgcctcacgcctcagcagcacaagctttatgtctgagcaatctgagcgtcca
agcagaaggatctggatgcaaggcagacggatgggatcttcagggagaaccataactaag
agcacaagtgtaagtggagaaatctacaagttagagcacaatgatggaagccagtcagat
acagcggtgggaacagttgggatatgtgggaagaaacgaagaccaagtttgagtgccaaa
gtagttgcaatagtatcaagaagaagtagaagcacatcgcagcttagccaaacagattcc
agcaacaagaaattcaaaagtacaatacaaagaagcacagaaaccggaatggcagctgaa
atgagaagtcgtatggttaggcagccaagcagagagtcaacagatggaagtattaacagc
tacagctctgaaggaaatttaatatttcctggagtaaggctgggtgttgacagccagttc
agtgactttctagatggacttggtcctgcacagttagtaggccgacagacactggcaact
cctgctatgggtgacatacaaattggtatggtagataagaaaggacaactagaagttgaa
gtaataagagcacgaggtctaatacaaaagcctggttcaaaatccacaccagctccatat
gtcaaggtgtatgttttagaaaatggagcatgtatagccaagaagaagacaagaattgca
agaaaaactcttgatcccctttatcaacagaccttggtttttgaggaaaatccccatgga
aaggtgcttcaggtaattgtctggggagattatggccgaatggatcacaaaagcttcatg
ggtgtggcacagattctcctggaagaacttgatctgtccagtgtggtgattggatggtac
aagttgtttccaccttcatcattggtggatccaacactgacaccccttactcgcagggct
tcccagtcatctcttgaaagttcaacagggcctccatctattaggtcttaa
DBGET
integrated database retrieval system
