Pyxicephalus adspersus (African bullfrog): 140328792
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Entry
140328792 CDS
T11284
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140328792 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pads04121
]
140328792 (TRIM54)
Ubiquitin system [BR:
pads04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
140328792 (TRIM54)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
TRIM_CC
zf-RING_6
DUF8512
CoiA_N
Sina_RING
DNA_pol_phi
Prok-RING_4
DUF6414
DUF6631
Zn_ribbon_FGT1_2
CRLF3_N
DNA_topoisoIV
Motif
Other DBs
NCBI-GeneID:
140328792
NCBI-ProteinID:
XP_072264736
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All DBs
Position
4:353423..361209
Genome browser
AA seq
340 aa
AA seq
DB search
MNFAVGFKSLGGDTQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSSTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLNTKT
EQHLMCEEHEDEKINIYCLTCEVPTCSMCKVFGAHKDCEVAPLSSIYKRQKLVQDNSRRQ
KQHLSQRFDSLYNILEERKKELLQVIARQQEEKLQYVRGLIRKHGDHLEVTSKLVETSIQ
SMDEPQMAAFLQQAKELIKKITDMSKVSTIDRPDPGYENMDHFCVNVDCVSEMLRTIEFC
SGTQGEDEDDAFDAEESETTEEERGEPTDDSAARQRTATP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgccgtagggttcaaatctttagggggggacacccagaccatggacaacctg
gagaagcagctgatatgtcccatctgcctggagatgttcaccaaacccgtggtcatcctg
ccctgccagcataacctgtgccgcaagtgtgccaacgacatcttccaggcctccaaccca
ctgtggcagtcccgcggctccagcacggtgtcctcaggggggcgtttccgctgcccatcc
tgccgccatgaggtggtcctggatagacatggagtgtacggactgcagaggaacctgctg
gtggaaaacatcatagacatctacaagcaggaatcctccagacctctgaacacaaagaca
gaacaacacttaatgtgtgaagaacacgaggatgagaaaatcaacatttattgcttgacc
tgtgaggtgcccacctgttctatgtgtaaggtgtttggggcccacaaggactgcgaagtg
gcccctttgtccagcatctacaaaaggcagaagcttgtgcaggacaacagtcgcaggcag
aagcagcacctgagtcagagatttgactctctctataatatcctggaggagaggaagaag
gaattattgcaggtgatcgcgcggcagcaggaggagaagctgcagtatgtgcgtgggctg
atccgcaaacatggcgaccacctggaggtcacttccaagcttgtcgagacttccatacag
tccatggatgagccgcagatggctgccttcctgcagcaagccaaagagctgataaaaaag
atcaccgacatgtccaaggtctccacgatagaccggcctgaccccggatatgagaacatg
gaccacttctgtgtcaacgtggactgtgtgtctgagatgctaagaaccattgaattttgt
tcaggtacgcagggagaggatgaggatgacgcctttgatgcagaagaatcagaaacaacg
gaggaagagagaggcgagcctacagacgattctgctgcaaggcaaagaactgcaactccc
taa
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