Pyxicephalus adspersus (African bullfrog): 140328868
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Entry
140328868 CDS
T11284
Symbol
CDC40
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140328868 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pads03041
]
140328868 (CDC40)
Spliceosome [BR:
pads03041
]
Complex C
Other components
Step II factors
140328868 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
140328868
NCBI-ProteinID:
XP_072264861
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Position
4:80177442..80202653
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AA seq
567 aa
AA seq
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MAALGSLVSYGSGSDSDNEAEDEGLGSHLKPLPPGEKSLMVVNAAPEVAVKETVDVGVHL
DPHVKEIQYNPTYDTLFAPEFGPNNPFKTQQMAAPRNMLSGYAEPTHINDFMFEQQRRTF
ATYGYALDPSLDVQDTTTKYIGSVDEAEKNQGLTVFESGQKKPDKRKKVKGRDASDIDGF
LGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKRGKQEEEKPADEKTILHVKEMXDYQGR
SYLHVPQDVDVNLRSTEPPEKCYLPKKQIHVWSGHTKGVSAVSLFPFSGHLLLSCSMDCK
IKLWEVYNERRCLRTFIGHSKAVRDICFNNSGTQFLSAAYDRYLKLWDSETGQCISRFTN
RKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRTGEIVQEYDRHLGAVNTITFVDENRR
FVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQN
RFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLKIWDWKTTKLYSRLKAHDKV
CISAVWHPHETSKVITCGWDGLIKLWD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttgggttccttagtttcttacggtagtggctctgattctgataacgaagcg
gaggatgaagggcttggctcccacttaaagccattacctccaggggagaaatcgctgatg
gtagtgaacgcggcgcctgaggtggcagtgaaggaaactgttgatgtcggagttcatctt
gatcctcatgttaaggaaatacaatacaaccctacatatgacacgttatttgcacctgag
tttggacccaacaatccatttaaaacccagcagatggcagctccaaggaacatgctttca
ggatacgccgagccaacacacattaatgactttatgttcgaacagcaaagaagaacgttt
gcaacatatggttacgctctggatccatctttggatgttcaagatacaaccaccaaatac
ataggttctgtggatgaggctgagaaaaaccaagggttaaccgtatttgaatcaggtcag
aaaaaacctgataagaggaaaaaagtaaaaggcagagatgcttctgacatagatggtttc
ctaggaccatgggcaaaatatgttgatgaaaaagatgttgccaagccttcagaggaagag
cagaaagagctggatgagataactgcaaaaagacagaagagaggcaaacaggaggaagag
aaacctgctgatgagaagaccatattgcatgttaaagaaatgtaagactaccagggcaga
tcgtatctccacgttcctcaagatgtggatgtaaatctccgctccacagaaccaccagaa
aaatgttacctacctaagaaacagatccatgtctggtctggacatacaaagggtgtcagt
gctgtgagcttatttccattctctggacacttactgttgtcttgttctatggactgcaag
attaagctttgggaggtgtacaatgaaagaagatgtttacggacatttataggccacagt
aaagctgttcgagatatctgttttaacaatagtggaacacagttccttagtgcagcctat
gaccgctatctcaagctgtgggactcggagacagggcagtgtatttccaggtttacaaac
agaaaagttccatactgtgtcaaattcaatcctgatgaggataaacagaatttgtttgta
gccggaatgtcagataagaaaatagttcaatgggatattcgcactggagaaattgtccaa
gagtatgacaggcatttgggagctgtcaacaccattacttttgtggatgagaacaggcgc
ttcgtaagcacctctgatgataagagcttgagagtctgggaatgggatattcctgtggat
ttcaaatacatagcagagccaagtatgcactcaatgccagctgttacactttctcctaat
ggtaaatggctggcctgtcagtcaatggacaaccaaattttaatatttggtgcacaaaat
agattcaggctgaataaaaagaagatttttaagggtcatatggttgcaggctatgcttgt
caagttgacttttcgccagacatgagttatgtggtttctggtgatgcagatggaaaactg
aagatctgggactggaagacaacaaaactgtacagcagattgaaagctcatgataaagtg
tgcataagtgcagtgtggcacccacatgaaacatctaaagttatcacgtgtggatgggat
ggactcatcaaactttgggactaa
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