KEGG   Pyxicephalus adspersus (African bullfrog): 140329127
Entry
140329127         CDS       T11284                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pads  Pyxicephalus adspersus (African bullfrog)
Pathway
pads03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pads00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    140329127 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pads03021]
    140329127 (TAF5L)
   03036 Chromosome and associated proteins [BR:pads03036]
    140329127 (TAF5L)
Transcription machinery [BR:pads03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     140329127 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     140329127 (TAF5L)
Chromosome and associated proteins [BR:pads03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     140329127 (TAF5L)
    STAGA complex
     140329127 (TAF5L)
    TFTC complex
     140329127 (TAF5L)
    SAGA complex
     140329127 (TAF5L)
    SLIK complex
     140329127 (TAF5L)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd TFIID_NTD2 WDR55 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th DSE1_N Beta-prop_Aladin CFAP251_N Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_SCAP NBCH_WD40 Beta-prop_NOL10_N Beta-prop_SPT8 PAC11 Beta-prop_DCAF4 Beta-prop_VPS8 RMC1_N Tricorn_2nd Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_HPS5 ASA1 Beta-prop_WDR19_1st WD40_RFWD3 DUF7165 PEP5_VPS11_N Ge1_WD40 PROPPIN Cytochrom_D1 MIOS_WD40 TetR_C_22
Other DBs
NCBI-GeneID: 140329127
NCBI-ProteinID: XP_072265333
LinkDB
Position
4:complement(105541458..105549188)
AA seq 590 aa
MKRVRTEQIQLAVTCYLKRRHFIDIEGSLKQGLRLCQTAEEMAANLTVQAESSCTSAVSS
APWQVDPHQYELQFARLRNFLSEENCPYSQDVTSLLYPLFVYLHLDMVQNSLKSMVDSFY
SRFHGMFLNHPAQKDVIEQLQTTMTMQDIHSNTKLRAFLDNKYVVRLQEESYNYLLRYLQ
SDNNSALLKVLTLHIQLDVQPVRLTEYQLYTSETFSSRGESNNLDSQDVPTPILQNEAAL
EQLHDCIKKVKDGPPSLTTVCFYAFYNTDNLLNTAEISPNGKLLAAGFDNSSVKLWSLRS
KKLKTQPHTVNVSHIRLACDILEEEGEDEDQAGSEIKILRGHCGPVYSTRFLSNSSGLLS
CSEDSSIRYWDLKTYTNTVLYEGHAYPVWDLDVSTCSLFFASGSHDRTARLWSFDRTFPL
RIYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSSQQGNSVRLFTGHRGPVLALAFSPN
GRYLASAGEDQRLKLWDLASGTLYKELRGHTDNINSLAFSPDSSLIASASMDNSVRVWDI
RNTYCNAPSDGSSSELVGVYTGQTNNVLSVQFMACNLLMVTGTAQEHQEH
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgaagcgggtacgcacagagcagattcaattggcagtaacttgctatctcaaacgtcgt
cacttcatagatatagaaggatccctaaagcaagggctgaggctttgtcagactgcagag
gagatggcagctaatctaactgtacaagcagaatctagctgcaccagtgcagtgtcttca
gccccttggcaggttgacccacatcaatatgaattgcagtttgcaagattgaggaatttc
ctttcagaagaaaactgcccttacagtcaagatgtaacatctttgctatatcctctgttt
gtctacctccaccttgacatggtccagaatagccttaaaagcatggtggatagtttctac
agtcgattccatggcatgtttcttaatcatccagcgcaaaaagatgtaattgaacaactt
cagacaacgatgaccatgcaggacattcactcaaacaccaaactgagagcttttttagat
aacaaatatgtggtacgccttcaagaggaaagttacaactaccttttgcgctaccttcaa
agtgataacaacagtgctcttctcaaggtgctcactctgcacatccaactagacgtacaa
ccagtcagactcacagagtaccagctgtatacaagtgaaaccttttcttcaagaggagag
agtaacaaccttgactcacaggatgttccaacccctattttgcaaaatgaagccgctctt
gaacagttgcacgactgcataaagaaagtgaaggatggtccaccttcattgacaactgtg
tgtttttatgcattttacaacaccgacaacttgctgaatacagctgagatctctccgaat
gggaaacttctggctgctggatttgacaactcttctgtaaaactttggagcctgaggtca
aaaaaattaaaaacacaaccacacactgtgaatgtttctcacatacgactagcttgtgat
attttagaagaagagggtgaagatgaagaccaggctggtagtgaaattaagatacttaga
ggacactgtgggccagtttatagtacccgtttcctttctaacagctctggccttttgtcc
tgctctgaagattcatccattcgctattgggaccttaaaacctacacaaatactgtcctg
tacgaaggccatgcatatccagtctgggacctagatgttagtacctgcagtctttttttt
gcaagtggttcacatgatcgcacagccaggctctggtcatttgataggacatttcctctc
agaatatatgcaggacatttagctgatgttgactgtattaaattccatccaaattctaat
tatcttgccacaggatctactgataaaacagttcgattgtggagtagtcagcaaggaaac
tctgtaagactcttcacaggacatcgagggcctgtgcttgctcttgctttttccccaaat
ggacgttacctggcctcagctggggaggatcagcgtcttaaactttgggatttggcatca
gggacactctataaagagctgagagggcacactgataacatcaacagtcttgcattcagt
cctgacagcagcttaattgcttctgcatctatggacaactctgtccgtgtatgggatatt
cgaaatacatattgtaatgccccttctgatggttcttctagtgaactagtcggtgtatac
acaggacagactaataatgtgttgagtgttcaatttatggcatgtaacctgcttatggtt
actggaactgcacaagaacaccaggaacattaa

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