Pyxicephalus adspersus (African bullfrog): 140329162
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Entry
140329162 CDS
T11284
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pads04121
]
140329162 (SHPRH)
Enzymes [BR:
pads01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140329162 (SHPRH)
Ubiquitin system [BR:
pads04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140329162 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
m04gp34like
Motif
Other DBs
NCBI-GeneID:
140329162
NCBI-ProteinID:
XP_072265385
LinkDB
All DBs
Position
4:complement(110170721..110226060)
Genome browser
AA seq
1647 aa
AA seq
DB search
MAGRRKRGAPVKLDDEAKKQLCWNMHEDRKNDQTIEVNESDLNASTSFSFVNDKPESLFP
TLGPKNISSEFYTEEKKGSDIILTQVFTDLTILNSPEEVDDLGKVLIGIFSIYFKSTQHS
QTIFHDCNFTLTKNASQSTQLLLCAHKRGTEVDDEGTLNLYNNTEELMVEVSVGEELLED
LIWLQKKKLIALCQRQIELDEMKVGIYLLESCLSKPEFLSEGHRRMKKSGLIIQRLMEKF
YNITIPDINEDDDEESDQDLERQNIEELYDYVRQIHQQEGHGLHEDVQHPALIPVLRPYQ
NDAVNWMLERENYKNVASSENSLHALWREVTTLDGVKIYYNPFSGSIIREYPGASHEWPG
GILADEMGLGKTVEVLSLILCHPRKEIQADLLMLPEGRVVNYFIPNPPAEAESKIKKAGD
RLIYPSLQVMILTAIKEMSVSKGVSVIGILKYVSSVYSYDMQRNHWQLKKTLEKLLSKKI
VEQVKGRGLQGSFKLGVNYKEQMTQEKPQTLRTRSSSRTQHNRNHLKENNKEISETGAVI
DIMSKDHDYCAVNKHNEHQNSATANGISKRMSGVEAFTLTDNSPTATSDGPAFVKPADLG
TKPVDENLESSQIVVPSNTSDYRFECICGGLQYPDLKDRVQCLQCHLWQHAECVNYRRES
VDTVPFYCPHCLVAMKPVPTGATLIISPSSICHQWVDEINRHVRSSSLQVMVYQGVKKHG
FLQPQMLAEQDVVITTYDVLRTELNYVDIPHSNSKDGRRFRNQKRYMAIPSPLIAVEWWR
ICLDEAQMVECTTAKAAEMALRLTGVHRWCVSGTPVQRGLEDLFGLVLFLGVDPYWVKHW
WDQLLYKPYCRKDPLPLYRLIAKIMWRSAKKDVIDQIQIPEQTEDIHWLHFSPVERHFYH
RQHEVCCQDALAKLRKISDWSLKLSSLDRRTVSSILYPLLRLRQACCHPQAVRGEFLPLQ
KSTMTMEELLTSLQKKCRTECEEAHRQLVCAFNGLAGIHIIKGEYTMAAEFYREVLRSSE
EHKEKLKTDSLQRLHSTHNLLELLTAKHPGIPPTLRDGRLEEEIKQLKEHYMTKSNAEVS
EAHQALQPILQNLRELQRKINFSSPWWIDVIQRAIHNSSDEDLVQRVQNEITTRYKHQVN
KLSMADKFRDCRGLQYIVTTQMEELRKCQKLVRDAVKNLEGPPTQEIIQTASVCHLRVGR
LPLHICVFCKADELFTDYESKLFAPTVKGQTAIFEEMIEEENGVVDDCLPKTSRGLWAAS
EVERALKAILAFARSHRMDTWLADEGATFMELFEAWKKEYKLLHEYWMALRNYVSAIDEL
SMATQRIRVRLPDEPKPNPPVLHIFEPHEVEQNRVRLLNDKAVAQSQLQKKLGQLLYLSN
LEKSQDKTTGGVNPEPCPICARSLGKQWAVLTCGHCFCNECVAIMVEQYSVGARKSAIKC
AICRQTTSHKEISYVFTSEAANEEQDVPVKGSHSTKVEAVVRTLLKIQSMDPGAKSLVFS
TWQDVLDIIAKALQDNGLVFSQINGIQKFQENLSAFKYDPKINILLLPLHTGSNGLNIIE
ATHVLLVEPILNPAHELQAIGRVHRIGQKKATIVHRFLIKATIEERMQAMIKTVDKSHTS
ASMKQSEASVLTVADLADLFTEERELE
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgtagaaaaaggggtgctccagtgaagctggatgatgaagcaaagaagcaa
ttatgctggaacatgcatgaagacagaaaaaatgaccaaacaatagaagtgaatgaaagt
gatctaaatgccagtacatcattctcatttgtaaatgacaaaccagaaagtctgtttccc
acattgggacccaaaaatattagttcagagttttacacagaggaaaaaaaaggatcagat
atcatccttacacaagttttcactgacctaaccattttgaactcccctgaagaagttgac
gatttagggaaagtgttaataggtattttcagtatttattttaaatctacacaacactct
caaactatttttcatgactgcaattttacattgactaaaaatgcttcacaatcgactcag
ctactgctttgtgcccataaaagaggaacggaggtggatgatgaagggactttaaattta
tacaataacacagaagagctcatggttgaagtctcagttggtgaggagttacttgaagat
ttaatatggttgcaaaaaaagaagctgattgcactttgtcaaagacaaatagaactcgat
gaaatgaaggttgggatctacttgctagagtcttgtttatctaagcctgaatttctcagc
gaagggcacagaagaatgaaaaaatccgggcttattatccagcgtctgatggaaaaattc
tataacatcactattccagatatcaatgaggatgatgatgaagagtcagaccaagatctg
gagagacaaaatattgaagaactttatgattatgtaagacagatacatcaacaggaagga
cacggtcttcatgaagatgtgcagcatccagctttgatacctgtactccgtccataccaa
aatgatgctgtcaactggatgcttgaaagagaaaactacaaaaatgtggcttctagtgaa
aactctttgcatgcattatggagggaagtaaccacacttgacggagtgaagatctactat
aatccattcagtggaagtattattcgtgaataccctggtgcttctcacgagtggcctgga
ggtattcttgcagatgaaatgggccttggaaagaccgtggaagttctaagtttgatcctt
tgtcacccaagaaaagaaatccaagctgacctactaatgttacctgagggaagagttgta
aactattttattccaaatccaccagcagaagcagaatctaaaattaaaaaagctggagat
aggctaatctatccaagtttacaagttatgattctgacagcaattaaagaaatgagtgtt
agcaaaggtgtgtctgtaattggcatacttaaatatgtgagctccgtatatagttatgac
atgcagaggaaccactggcaacttaaaaagactttggaaaagcttctttctaaaaagatt
gtggaacaagttaaaggacgtggactacaaggatcttttaaactgggggttaattacaaa
gaacagatgacacaagaaaaaccacaaacactgagaacaagatcatccagtagaacacag
cacaatagaaatcacctcaaagaaaacaataaagagatttctgaaaccggcgctgttatc
gatataatgtcaaaggatcatgactactgtgctgtaaacaagcataatgaacaccaaaac
tcagcgacggcaaatggaatttcaaaaagaatgtcgggtgtggaagcttttactttgaca
gataattcacctacagccacaagtgacggcccagcttttgtgaaacctgctgatttagga
acaaaaccagtagatgagaacttggagtcctctcaaatagtcgttcctagcaatacctca
gattaccgatttgaatgtatatgtggaggactccaatatcctgacctcaaggacagagta
cagtgcttacagtgtcatttatggcagcatgctgagtgtgtaaactatagaagagaaagt
gtggacacagtaccattttactgcccacactgtctagtagcaatgaaaccagtccccaca
ggtgcaaccctgatcatttcccccagttctatttgccaccagtgggtagatgaaattaac
agacatgtccgctcatcctctttacaagttatggtttatcaaggtgtaaagaaacatggt
tttctgcagcctcaaatgttggcagagcaagatgtggtgataaccacttatgatgttcta
agaaccgagctaaattatgtggacatccctcacagcaacagcaaagatggacgaaggttt
cggaaccaaaagcggtacatggcaataccaagcccactcattgctgtggagtggtggagg
atctgtttagatgaagcacagatggtggagtgcacaacagcaaaggctgctgaaatggcc
ctgcggctaactggggttcatagatggtgtgtgagtggtaccccagtgcaaagaggatta
gaagatttgtttggtttggtattatttcttggagtggacccttactgggttaaacactgg
tgggaccagctgctctacaagccatattgcaggaaggatcctctgccattataccgcctt
atagccaaaataatgtggagatctgcaaaaaaggatgtcattgaccagattcaaatccca
gagcaaacagaagatattcactggctgcatttctccccagtggaaagacatttctaccac
cggcagcatgaagtatgttgtcaggatgcccttgctaaactacgtaaaatctcagattgg
tcactcaagctgagtagtttggacagacgaaccgtttcctccattttgtatcccctgctg
aggctaaggcaggcctgttgccacccgcaggctgtccgtggagagtttttaccattacag
aagagcacaatgacaatggaagaattgctgacatctctgcagaagaaatgtcgaacagag
tgtgaagaggcccatcgtcaacttgtctgcgcttttaatggtctggctggaatccacata
attaaaggtgaatacacaatggctgcagaattttatagagaggtattgaggtcatcagaa
gaacacaaagagaaactgaaaactgactctttacaaaggctgcattctacacacaaccta
ttggaacttctgacagcaaaacaccctggaatcccaccaacacttagagatggcagactg
gaagaagagataaaacagcttaaagaacactacatgaccaaatccaatgctgaagtatct
gaagctcaccaagctttacaaccaatcttgcaaaatttaagagaacttcaacgaaagata
aatttctcctccccttggtggattgatgtgatccagcgtgcgattcataattccagtgat
gaagatcttgttcagcgtgtacaaaatgaaataacaaccagatataagcatcaagttaat
aagctctccatggctgataagttccgtgactgccgaggacttcagtacattgtcacgacg
cagatggaagaactaaggaaatgccagaaactggtgagagatgctgtgaagaaccttgag
ggtccccctactcaagaaattatccagactgcatcagtatgtcaccttcgagttggtcga
cttccactccacatctgtgtcttttgtaaagctgatgaattattcacagattatgagtca
aagctcttcgctcctacggtaaaaggtcaaactgccatttttgaagagatgattgaagaa
gagaatggtgttgtggatgattgcttgcccaaaaccagtcgaggtctgtgggctgctagt
gaagtggaacgtgctttaaaagctattttggcatttgccagaagccatcgaatggataca
tggctagctgatgaaggtgctacattcatggagctatttgaagcatggaaaaaagaatac
aagttacttcatgaatattggatggccttaagaaattatgtgtcagctatcgatgaactt
tctatggcaacccagcgtataagggtccgtctccctgatgaaccaaagcctaacccacct
gttcttcatatttttgaaccacatgaggtggagcagaaccgtgtaaggctgctaaatgac
aaagcagttgcccagtcacaactgcagaagaagctgggacagctcctttatcttagtaat
ttagagaagtctcaggataaaacaactggaggagtgaatccagagccctgcccgatatgt
gcccggagtctaggaaaacagtgggcagtattaacctgtggccactgcttttgtaatgag
tgtgtggcgatcatggtagaacagtatagtgtcggtgctcgtaaaagtgccatcaaatgt
gcgatttgtcggcagacaacctcacataaagagatctcttatgtgttcacaagtgaagct
gcaaatgaagaacaggatgttcccgtaaagggaagccattccaccaaagttgaagcagta
gttcgaactcttctaaaaatacagtccatggaccctggagccaaatcattggtattttct
acgtggcaagatgtgttggatatcattgcaaaagctctgcaggacaatggcttggtgttc
tcacagattaatggcattcagaaatttcaggaaaacctttcagcatttaaatatgatcct
aagatcaacattttgcttcttccactgcacactggatccaatggccttaacatcattgaa
gcaactcatgtgttattagtggagcccattctaaacccagcacatgaactgcaagctata
ggtcgtgtccatcgtattggccagaaaaaggctacaatagttcatagatttttaatcaaa
gcaacaattgaagaaaggatgcaagcaatgataaagactgtggacaagagtcacacaagt
gcatctatgaagcagtctgaagcttctgtcctgactgtagccgatcttgctgacctgttt
actgaagagagagaacttgagtaa
DBGET
integrated database retrieval system
