Pyxicephalus adspersus (African bullfrog): 140329366
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Entry
140329366 CDS
T11284
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140329366 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pads03041
]
140329366 (PRPF40B)
Spliceosome [BR:
pads03041
]
Complex A
U1 snRNP components
U1 related factors
140329366 (PRPF40B)
Complex B
140329366 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
WW_2
DUF4936
LUD_dom
DTW
Motif
Other DBs
NCBI-GeneID:
140329366
NCBI-ProteinID:
XP_072265695
LinkDB
All DBs
Position
1:complement(45501291..45549015)
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AA seq
932 aa
AA seq
DB search
MEETSEGSRLPAELKSAPDSGTAPPGQSASFPTAPPLMPPPFMPPPGLPPPFPPIGLPPV
GQRGAAMPPIPHAMMPPMIPPMAGPPPLAQLPSLVPPLLPTMMLPAVTTTASSMVAAPGT
ESVGSPVTQPAPSVPKMTVDDQSPSQDIPKKKSLWTEHKAPDGRTYYYNTETKQSTWEKP
DELKSKTELLFSQCNWKEYKSDTGKSYYYNSQTKESRWTKPKDLEELEVLIKQEEEARVD
HENQSAASSPHSTAPSSDTEMTPTEEIRVTQPSVPELTNTTEIESMQEDSGVYQTEITNS
NSSQMEDGNKIEPEKTCYHWNTKEEAKQLFKELLKDKGVSSNASWEQAMKMIINDPRYSA
LPKLSEKKQAFNAYKSQREKEEKEETRLRAKEAKERLQRFLEQHDKMTSTTRYRKAEQMF
ADQEVWSVVPERDRKEIYDDVLFFLAKKEKEQAKQLRKRNVQALKNILDNMSNVSFQTTW
SEAQQYLMDNPMFAEDEELQNMDKEDALICFEEHIRTLEKDEAEEKEKSRLRERRQQRKN
RESFQVFLDELHETGQLHSMSTWMELYPFVSTDFRFANMLGQTGSTPLDLFKFYVEDLKA
RFHDEKKIIKDILKDRNFGVEVNTTFEDFAHIISFDKRAATLDAGNIKLTFNSLLEKAEA
RERERGKEEARKFRRKEAAFKSMLKQAAPPLEADSLWDDVRERFVGDSAFNQITVESERI
RLFKEFLLSIENECQHHHFKGKKHSKKAKKHHRKRSHSQSPSPAERVKKKTLDTFTAWDN
TGTVEKASETDEENHQHRPQKRKKRNHSESGSDISSSVDSEHSTKKSKRQKKKSKKKRHK
SNSPESEAEREKEKNIREKDEEGEQLRERAKDRDHHDQEVETADSHRRSLKQATRKDKVS
DSVKEHTCTAEHKQELLYLGWPYTTLRIESSL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggaagagacctctgaagggtccagactgcctgcggaattgaagtcagcaccagactca
ggaacagctccacctggccaatctgcatcttttcctactgctcctcccctaatgcctcca
ccttttatgcctccccctgggcttccacctccctttccaccaattggattgccaccagtt
ggacagaggggtgctgcaatgccccctattccacatgcgatgatgccaccaatgattcca
cccatggcaggaccaccacctcttgctcagcttccaagcctggtgccaccattattgccg
accatgatgctaccagcagtaacaaccacagcctcttcaatggtggcagctccagggaca
gaatctgttggctcacctgtgacacagccagctccatctgtgccaaagatgactgtggat
gaccagtcaccctctcaggacattccaaaaaagaaatccctgtggacagagcacaaagca
ccagatggacgaacctactactataacacagaaaccaagcaatccacttgggagaagcca
gatgagctgaagtctaaaacagagcttctcttttcacaatgtaattggaaggaatataaa
tctgatacaggcaaatcctattattataactctcaaaccaaggagtcacgctggaccaag
cccaaagatttagaggaattggaagttttgataaaacaagaggaagaagccagagttgac
catgagaatcaatctgctgcgtccagtccccattctacagcaccttcttctgatactgaa
atgacacctacagaggagataagagtcacacagcccagtgtgccagaactcactaacacc
actgagatagaatcaatgcaggaggactctggagtttatcagacagaaattactaatagt
aattcctcacaaatggaggatggaaacaagatagagccagagaaaacatgttatcactgg
aacacaaaagaagaagcaaagcaattgtttaaggaactactgaaagataagggggtttct
tctaatgcatcatgggaacaagcaatgaaaatgattataaatgatccccgctacagtgca
ctacctaagctaagtgagaagaagcaggcattcaatgcttataaatcacagcgtgaaaag
gaggaaaaggaggagacaagacttagagctaaagaagcaaaggagaggttgcaacgtttt
ctagaacaacatgacaagatgacttcaaccactcgctacaggaaagctgaacagatgttt
gctgatcaagaagtgtggtctgttgttccggagcgggatcgcaaagaaatttatgatgat
gtgttattctttctagcaaaaaaagaaaaggaacaggcaaagcagctaagaaaacgtaat
gttcaagcactgaaaaatattttagataacatgagcaatgtcagcttccaaactacttgg
tcagaagcccagcaatatctcatggataatcccatgtttgcagaggatgaagagctgcaa
aatatggataaggaggatgccctaatttgctttgaggagcacataagaactctggagaaa
gatgaagcagaagagaaagagaaaagccgactacgtgagagacgccagcagcgcaaaaat
cgagaatctttccaggtgtttcttgatgagcttcatgagactggtcagttacactccatg
tctacatggatggagctctacccttttgtcagcactgactttcgttttgctaacatgctg
ggacagacaggctctactcctcttgatctttttaagttttatgtggaagatctgaaggct
cgattccatgatgagaaaaagataattaaagatattttgaaggaccgtaactttggtgtg
gaagtgaacactacatttgaagactttgctcacattatcagttttgacaagcgagcagcc
acccttgatgcaggaaatattaagcttacatttaatagcttgctggagaaagccgaagct
cgggagcgtgagcgaggaaaggaggaagctcgcaagtttcgaaggaaggaagctgcattt
aaaagcatgctaaagcaggccgctcctcctctggaagcagacagcctctgggatgatgtc
cgagaacgctttgttggagacagtgctttcaatcaaatcacagtggaatcagaaagaatc
cgcctttttaaggagtttcttttatctattgagaatgaatgtcaacaccaccacttcaaa
ggcaaaaagcactcaaagaaagccaagaaacaccaccgtaaacgcagtcactcacagtca
ccaagtcctgcagagagggtgaagaagaagactttggacacattcactgcatgggacaat
actgggactgtggagaaggcgtctgaaaccgatgaagaaaatcatcagcatagaccacaa
aaaagaaaaaagagaaatcattcagagtcgggatcagacatctcatcatcggttgattca
gaacacagcaccaagaaatctaagagacagaagaagaagagtaagaagaaaaggcacaaa
tcgaacagtcctgaaagtgaagcagaaagggaaaaagaaaaaaacataagagaaaaagat
gaggaaggtgagcaactgagagagagagcaaaagacagagaccaccacgatcaagaggtg
gagactgccgacagtcatcgcaggtcattaaagcaagccacaagaaaggacaaagtgagt
gattctgtaaaagaacatacatgcacagctgaacataaacaggagttgctttatcttgga
tggccatatacaacattaagaattgaatcatcattgtga
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