Pyxicephalus adspersus (African bullfrog): 140329833
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Entry
140329833 CDS
T11284
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140329833 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140329833 (HBS1L)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140329833 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140329833
NCBI-ProteinID:
XP_072266326
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Position
4:complement(89338992..89383909)
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AA seq
849 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDMYGQSVEDDYCISPATAAQFIYSKRDRHSSFTEPLEEEEE
YEDEELEKPKASNIALSSFDQARLYSCLESMREVLGESVSEQAMIDAALKCQFDVPKALD
LVFKQDCNTSAKPISQDLHSTGKPAKEAIYFSKHSLSSDRLLCSPAQHNSQYLATRKRQP
TDLTDNGKENLISDFPPCLSLSALINESSHANPSSLKPAALTEMSLSDLLSYSNISESSD
LPTTKALEISTTSNLTAHIPNLKELQLDFLKSGSAKGSDQTDPVNCDTLGALSSLQASSL
PKHLIAENHVLNEPINLFGSLSSVLHSEDSMSSDGENLSVPKFGSPSLADLILEHKERNS
LQDLTIETPQRNPSVELHTGSLLPFSQFSDLSLNDVPYLTTSLSSLSVNQPDAVAEPHIS
LSDLIAESKKPIPEDPNVFPMSLTETDTNIDLRFLIGEPNDTYPQIINAKSVSSEPLESK
HSIYRSPYSQKVSKIHKKKTHWVKTLKARPSAFALCLCYKYIPKPRKNTVLKTLQDQECN
SSAMISDTGHPALIPFDFQTPSPDDFVKESQKKAFVNWQKDRFQEITSKLGHFLKQAGFK
DRDVSYIPTSGLSGENLAKGSQISDLISWYKGPCLIDQIDSFKAPQRSIDKPFRLCASDV
FKDQGSGFCVTGKIEAGYVQVGDRILAMPPNETCTVKGITLHDEAVDWAAAGDHVSLTLT
GMDIIKINIGCVFCSQSEPIKACTRFQARVLIFNFDVPITQGFPVIIHYQTVSEPATIRK
LVSVLHKSTGEVIKKKPKCLTKGMNAVIELQTQRPVSLELYKDFKELGRFMLRYSGSSIA
AGVVTEIKE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcaccggaacgtacgcggctacaactatgatgaggattttgaggatgatgat
atgtatggacagtctgtcgaagatgactattgtatttcaccagccacagctgctcagttc
atatattccaagcgtgacagacactcaagctttactgaacctctggaagaggaggaggag
tatgaagatgaagaacttgaaaaaccaaaagcttcaaatattgctttgagttcgtttgat
caagctcgcctatactcatgcctggagtccatgagggaagtcctgggagagtctgtttca
gaacaagctatgatcgacgcagcattaaaatgtcagtttgatgtcccaaaggcccttgat
ctagtgttcaaacaggattgcaacacaagcgccaagcctataagccaagatctgcactct
actgggaaaccagcaaaagaagccatttatttttctaaacacagtttatccagtgaccgc
cttttatgttctcctgctcagcacaattcacagtatcttgctacaaggaaaagacaacct
actgacctgactgacaatggaaaggaaaatctaatttctgactttccaccttgcctgtct
ttatctgccctgataaatgaaagttcacatgcaaaccctagtagtttaaaacccgctgct
ttgactgaaatgagtctgtctgatttactttcatattcaaacatctcagaaagttcagat
ctgccaacaactaaagctcttgaaatatccacaacctctaatcttactgcccatattcca
aatttaaaggaattgcagctagactttttaaaaagtggatctgccaagggttcagatcaa
acagatcctgtaaactgtgacactttgggtgccttgagcagtttgcaagcatcctctctt
cctaaacacctcatagcagaaaatcatgtcttaaatgaaccaattaatttgttcggcagt
cttagttcagttttacattctgaggatagtatgtcctctgatggagaaaatttgtctgtg
cctaaatttggaagtccatcactggcagatctgattctggagcataaagagaggaattcc
ctccaagaccttactattgaaactccacagaggaatcccagtgtagaattgcacactggc
tcccttttacctttttctcagttttcagatctgtcattaaatgatgttccatacttgaca
acatccttgtcatcactatctgttaatcagccggatgctgttgcagagccacatatttcc
ctgtctgatctaattgctgagtctaagaagcccattcctgaggaccccaatgtgtttcct
atgtccttgactgaaactgatacaaatattgatctccgctttctcattggcgaacccaat
gacacttatccccaaattataaatgcaaagtcagtatcttcagaacctctagaatcaaaa
cattcaatttacagatctccttactctcaaaaagtttctaagattcataaaaaaaagacc
cactgggtaaagactttaaaagccagaccctctgcatttgcattatgtttgtgttataaa
tacattccaaaaccacgcaagaacactgtcttaaagactcttcaggaccaggaatgtaac
tcatcagccatgattagtgacacgggtcacccagcactgatcccttttgattttcaaacc
ccttcccctgatgactttgtgaaagagagccagaaaaaagcttttgttaactggcaaaaa
gatcgatttcaggaaattactagtaagctgggacactttttgaaacaagctggatttaag
gacagagatgtgtcttacattcctaccagtggacttagtggagaaaatttggccaaaggt
agtcaaatatctgatctcataagctggtataaaggaccgtgccttattgaccaaattgat
tcctttaaagccccacagcgttccatagataaaccttttagactttgtgcatcggatgtt
ttcaaagatcaaggctctggattttgtgtgactggcaaaatagaagctggctacgtacaa
gttggtgaccgcattctagccatgcctcctaatgaaacatgcacagtaaaaggaatcacc
ttacatgatgaagcagttgattgggccgcagcaggagatcacgttagtctcactttaacc
ggcatggatatcataaaaatcaatataggatgtgtattttgcagtcaaagtgaacctatt
aaagcctgcactcgtttccaagccagagttcttatctttaactttgatgtccctataacc
caaggttttccagtaatcatccactaccaaactgtaagtgaacctgctactatcaggaag
ctggtcagtgtcttacacaagagcacgggggaggtgataaagaaaaagccaaagtgtctg
actaaaggaatgaatgctgtaatagaacttcaaacacagagacctgtttctttagaatta
tacaaagactttaaagagcttggaaggttcatgttgcgttacagtgggtcatccatagct
gctggagttgtcaccgagataaaagaatga
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