Pyxicephalus adspersus (African bullfrog): 140329963
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Entry
140329963 CDS
T11284
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads00100
Steroid biosynthesis
pads01100
Metabolic pathways
Module
pads_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
140329963
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pads01006
]
140329963
Enzymes [BR:
pads01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
140329963
Prenyltransferases [BR:
pads01006
]
Terpene biosynthesis
Squalene/phytoene synthase
140329963
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF4075
HAUS4
Motif
Other DBs
NCBI-GeneID:
140329963
NCBI-ProteinID:
XP_072266450
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All DBs
Position
4:9421617..9438733
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AA seq
378 aa
AA seq
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MDFLRSLGHPEEIYNLIRYKLGGCPALMNKVEQDSMSESLQTCYKYLNETGRSVAIVIQA
LDSDLRHACCIFYLVLRAVDTVEDDMTISLETKIPILKNIHNILYQPEWRYTESKNKHRQ
VLEDFPTISQEFRNLPLVYQEVIANFVHQSGLGMTWYLVKKIESVQDWEEYCHYSGSTLI
IGMSVLFSVSGLEEPIVEEDTRLSNSVGLFMQKSNSIRDYLEDQMNGIELWPREVWGKYG
KNLSDFTKPANIVPALQCLNELITNILQHVPDVLLYLSRLRNQNIFNFAAIPLMMAIATM
ATCYNNQQVFKGVVKIRKGQAVTLMMNSTNMKAIRAITCQYVEEICVKIPTTDPSSEQTR
TILATIRKICMSNMASPQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttgcggtctcttggccaccccgaggagatctacaacctcatcaggtacaag
ctgggcggctgcccggcgctgatgaacaaggtggagcaggactccatgagtgagagcctt
cagacctgctacaaatatctaaatgaaaccggcagaagtgttgcaattgtcattcaggcc
ctggacagtgacctgcgtcacgcatgctgtatcttctatctggttctgcgagctgtggac
actgtagaggatgacatgaccatcagtctggagaccaagattcccatccttaaaaacatc
cacaacattttgtaccagcctgagtggaggtatacagagagcaagaataaacatcgccaa
gtgctcgaggatttcccaacaatctctcaggaatttcgcaacttacctttggtctaccag
gaagtgattgccaactttgttcaccaatcagggctgggaatgacatggtacctggtcaag
aaaatagagtctgtacaagactgggaagagtactgtcactattcaggcagcaccttgata
attggaatgtcggttctgttctctgtctccggcctggaggagcccattgtagaagaagac
acccgactctccaactctgtaggcttgttcatgcagaagtccaacagcatccgtgattac
ctggaagaccagatgaacggcatagagctttggccaagggaggtatggggtaaatatggg
aagaacttgtctgactttaccaagccggcaaacattgttccagccttgcagtgtctgaat
gagctcatcaccaacatcctgcaacatgtgcccgatgtcttgctgtacctttcccgactg
aggaatcagaacatcttcaactttgctgcaatacccctgatgatggctattgccaccatg
gccacctgctataacaaccaacaagtgtttaaaggagtagtgaagatccggaagggccag
gctgtgactctgatgatgaactccacaaacatgaaggctataagagccatcacttgtcag
tacgtggaggagatctgtgtgaagattcccacaacagatccgtcatctgagcagacacga
accattcttgctaccatcagaaaaatatgtatgtccaatatggcttcaccccaataa
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