Pyxicephalus adspersus (African bullfrog): 140330469
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Entry
140330469 CDS
T11284
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
140330469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pads04121
]
140330469
Enzymes [BR:
pads01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140330469
Ubiquitin system [BR:
pads04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
140330469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-RING_4
ANCHR-like_BBOX
U-box
zf-ANAPC11
Prok-RING_4
DUF948
Fib_alpha
zf-RING_10
DUF3450
Exonuc_VII_L
PFU
DUF2383
SOGA1-2-like_CC
Spore_III_AB
Laminin_II
DUF7605
RmuC
Motif
Other DBs
NCBI-GeneID:
140330469
NCBI-ProteinID:
XP_072266711
LinkDB
All DBs
Position
5:5196580..5199049
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AA seq
528 aa
AA seq
DB search
MASADLRQELGCSICLNIYTDPVMLRCGHNFCRVCIDRVLDTQEGSGGYSCPECREEFQD
RPALHRNITLRNIVETFRSTQTDQQETEIFCTYCIHFPVPAVKSCLHCEASLCDNHLRVH
SKSPEHVLTDPSTSMEKRKCSVHRELLKYYCPADAACICVSCRLVGDHQGHKVEMLDEAA
EKKTHKLRNVLQKLTAEREETEKRVQSLQEDMINVQEKSSGLTEEVTNLFRDLRRQLEDL
EKRVLSEISRQEAHLSLSLSDMIQQLEIKEEELAMEIDDIEDLCNMTDPLTVLQESDTWD
LCDTEHGDNEDRERLDELLHDGRSLDVAGISHTLHTGVSDMIKEVNACYNIQEAADILLD
VNTAYNNLQISDDMKTVSRSDKKQNRPETPKRFQDYSQILGSRRFPSGRHYWEVDVSNSE
WWAVGMCYPSIDRRGKKSYIGDNRKSWGLYRYYRSCTVMHDSYKIRLPYNISSNRVRVYL
DYEAGQLSFYDMCDPIRHLYTFTTSFTEPLHAALWLGDGGSIKISGGN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctgatctgagacaggagttgggctgttccatctgtttgaacatttataca
gatcctgtaatgctgagatgtggacacaacttctgccgggtctgtattgatcgtgtgttg
gatacacaggaggggtctggaggttattcctgtcctgaatgcagagaagagtttcaggat
cggcctgcactccataggaacataacactgcgtaatatagtggagactttccgatctact
cagacagatcagcaagaaaccgaaatcttctgtacttattgtattcactttcctgtacct
gctgttaaatcctgtctgcattgtgaagcttctctgtgtgataatcacctgagagtccac
agcaagtcaccagaacatgtcctaactgaccccagcacttccatggagaagaggaaatgc
tccgtccatagggaactccttaaatattattgccctgcggatgccgcctgtatctgtgtg
tcctgtaggctggttggagatcaccagggacacaaggtggagatgctggatgaggccgca
gagaagaagacacacaaactaagaaatgttctgcagaaactgactgcagagagagaggag
actgagaaaagagtccaaagtctgcaggaagacatgataaatgtacaagaaaaatcatct
ggtttaacagaagaagtcaccaacctgttcagagacctcaggagacagctggaagacctg
gagaagagagtcctgagtgagatctccaggcaggaagcgcacctttcactatcattgtct
gatatgatccaacagctggaaataaaggaggaggagctggccatggagattgatgacatt
gaggacctgtgtaacatgactgacccactgactgtcctacaggaatcagacacatgggac
ttgtgtgatactgagcatggagataatgaggacagagagagacttgacgagctcctccat
gatggaagatctctggatgtggctgggatatcacacacattacacacaggggtatctgat
atgataaaagaagtaaatgcatgctacaatattcaggaagctgcagacatattactggat
gtgaatactgcttataataatctacagatatcagatgacatgaaaactgtatccaggtca
gataagaagcagaatcgcccagaaacaccaaagagatttcaggattatagtcagatatta
ggcagcagaagattcccctcagggcgacattactgggaagtggatgtcagtaattcagag
tggtgggcagtcgggatgtgttatcccagtatagacaggagaggaaagaagtcatatatt
ggagataataggaagtcctggggtttgtacaggtattacaggagctgtacagtaatgcat
gacagttataaaatccggttaccttacaatatctccagtaacagagtcagggtctatctg
gattatgaggccgggcagttgtctttttatgatatgtgtgaccccatcagacacttatac
accttcaccacctccttcactgagcccctccatgctgcgttatggctgggggatggtgga
agtataaagatatctggggggaattag
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