Pyxicephalus adspersus (African bullfrog): 140330527
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Entry
140330527 CDS
T11284
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pads00535
]
140330527 (COL14A1)
Proteoglycans [BR:
pads00535
]
Extracellular matrix (ECM) proteoglycans
Others
140330527 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_Dep-1_2nd
VWA_3
Motif
Other DBs
NCBI-GeneID:
140330527
NCBI-ProteinID:
XP_072266788
LinkDB
All DBs
Position
5:complement(13809539..13931361)
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AA seq
1769 aa
AA seq
DB search
MKGQHSVHTMIALSLLAVTVFFSGLGQSQVTSPTKLRFHVVSQDSVQISWKASKDKIRGY
KLLVTPKSGGKTNQLNLKNNATRAIIQRLDPDRSYNVQIIAFNEDDESKPVRGEFRIRDL
EKKKKTAKNRMSEIENNILEEDSKFSCKTPANADIVILVDGSWSIGRVNFRLVRSFIENL
VGAFNVASDKTRIGLAQYSGDPRIEWNLNTYDTKEAVLDAVRNLPYKGGNTLTGLALTYI
LENSFKPEAGARDDLPKIGILITDGKSQDDVIPPAKSLRDAGIELFAIGVKNADLNELKE
IASEPHTDHVYNVADFNIMDSIVGSLTKTVCERVEDIDINIKGEVAEVVGSPSELITSEV
TARSFRVSWTHAPGNVEKYRVVYYPTKGGQPEEVIVDGSVSTTVLKNLMSLTEYQIAVFA
VYTRSTTDGLRGAETTLALPMATDLELYDVTHRSMRAKWGGVAGATGYMILYAPLTEGLA
ADEKEMKVSGSVTDVELDELTPSTEYTVTVYAMFGEEASDPLTGQETTLPLSPPRDLRFS
NIEHSSATVSWDHSHKNANGYRIMYVKTGGSDINDVEVGRISSYNLKKLASLTEYTVAIF
SVFDEGQSEPLTGTFTTKPLPSPRDLKVRDITTHSFVAYWTHFASDIIMYKLQWTPRRGG
QTEEAILKGDISSYVINGLTHSTEYEVSLSAIFADESESDALSAVATTLTRTTQAPTTAR
PTTAVVRLGIRNLEIDDETTSSLHVSWTITDANIRQYIVSYITAYGDREEVKVVSGRENE
IVLQSLLSDTEYKVTVTPVYFNGEGNPVSASGRTLPLSAPRNLRVSDEWYNRLRITWDPP
PSPTLGYRIVYKPSSGSGPALETFVGDDVNTILILNLLSGTEYNLKVLASYSTGFSDALT
GVGKTLYLGVTNLSAYQVKMTSICSQWQLHRHATSYRIIIESLQDGSKQEAHLAGGTSRH
CFYELLPNSKYRITVYAQMQDAEGHGVSIVETTLPAPTAAPTRPPTPPPTIPVAREVCKS
ARADLVFLVDGSWSIGDDNFLKVIRFLFSTAGAFAEIGPDGTQVGVAQYSDDARTEFKLN
SHKSKESLLAAISAISYKGGNTKTGRAIKHVREDLFTAEAGMRKGVPRVLVVITDGRSQD
ETVKFANEMHLEGFSIFAIGVADADYNELVNIGSKPSERHVFFVDDFDGFKKIEDELVTF
ICETASATCPWAYIQGNSVSGFKMMEMFGLVQKEYATLDGVSMEPGTFNEFPCYRIHKDS
LVSQPTKHIHPEGLPTDYTISFLFRILPDTPKEPFALWEILNKDYEPLVGVILDNNGKTL
TFFNYDNKGQFQTITFEGPEVKKIFHGSFHKVHIIITTTNSRLVIDCKQIAEKPINPSGN
ITVDGLEVLGRMVRSRGPRDSSAPFQLQMFDIVCTSSWATRDKCCELPALRDEATCPPLP
NSCSCAQENKGLQGPPGPPGGAGMRGPKGSQGENGQPGSDGPPGPVGPPGAQGPPGPQGP
SGHSIQGPPGPPGLKGERGEAGLQGNQGLPGSSGIPGREGPTGQRGLPGKDGSSGPPGHP
GPMGAPGNPGSPGVPGGPGRQGETGPPGAPGVKGERGERGDTQSQNMVRAIARQVCEQII
QSHMARFNSLLNQIPSQSVSVRSIPGPPGEPGKQGPSGPPGEQGSPGRPGFPGNPGSPGT
PGDRGVPGEKGERGNPGVGTQGPRGPPGPTGMPGEGRTGSQGPSGPPGQRGLPGPPGTTG
PMGPPGPQGYCDAASCAGYGLIPYNDYQR
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcaacacagcgtgcacactatgatcgctctatcgctgttagcagtcacagtt
ttcttttccggtctggggcagagtcaagtgacgtcgcctacaaaactaaggttccatgtt
gtgtcacaagacagtgtacagatttcatggaaagcatccaaagataaaattagaggatat
aaacttcttgtgacaccaaaatcaggtgggaaaaccaaccagcttaatcttaaaaacaat
gccaccagagccatcattcaaagacttgatcccgaccggagttacaatgtacagatcatt
gcctttaatgaagatgatgaaagcaagccagttcgtggagagtttagaattagagatttg
gagaagaagaagaaaactgccaaaaatcgaatgtctgaaattgagaacaatattttggag
gaagactcaaagttttcctgtaaaacccctgccaatgccgatattgtaatcctggtcgat
ggatcctggagtattggaagagttaacttcagacttgtgagaagcttcattgagaattta
gttggagctttcaacgttgcttcagataaaacaagaatagggttggcacagtacagtggt
gaccccagaatagaatggaatctaaatacatatgacaccaaagaagccgtccttgatgct
gtccgaaacctgccttacaaaggtggaaacacacttacaggtcttgccttgacatacatt
ttggaaaacagttttaaacctgaagcaggagctagagatgatctcccaaagattggtatc
ctgattactgatggaaaatcacaagatgatgtcatcccacccgctaaaagtctgagggat
gctgggattgaactttttgctattggtgtgaaaaacgccgaccttaatgaattgaaggag
attgcctcagaaccccacaccgaccatgtttacaatgtagctgactttaacatcatggac
tccattgtggggtcactgacaaagaccgtgtgtgagagagtggaagatatcgacattaat
attaaaggggaggtagctgaagtggttggatccccctctgaattgatcacatcagaagta
acggcaagaagttttcgggttagctggactcatgccccaggaaatgtggaaaaatacaga
gtggtttattaccctaccaaagggggacagccagaagaggtgatagtagatggcagcgtg
tccactacggtgctgaagaacctgatgtctctaacagaataccagatcgcagtgtttgct
gtgtataccagatctacaacagatggactgcgaggagctgagaccactttggcattacca
atggccaccgatcttgaactgtatgatgtcacccaccgaagcatgagagcaaaatggggt
ggggttgctggagccactggttacatgatcttgtatgcacctctgactgaggggttagca
gctgatgagaaagagatgaaggtttctggatctgttacggatgttgagttggatgaactg
actcccagtacggaatacactgtgactgtctatgcaatgtttggagaagaggccagtgat
ccacttacaggacaggaaacaacattgccattaagtcctcccagagacctccgattttca
aacattgaacacagctcagccactgtctcctgggaccactcacataagaatgctaatggt
taccggattatgtatgtgaaaaccggaggttcagacatcaatgatgtggaagttgggcga
atttcatcctacaacctaaagaaacttgcatcacttacagagtacacggtggccattttt
tctgtttttgatgaaggacaatctgagcccctcacaggcacctttactacaaagcctttg
ccatctcctcgggacctaaaagtcagggatatcaccacacacagttttgtggcttattgg
acacattttgcatctgatataattatgtacaaactccaatggactcccagaagaggcggc
caaaccgaagaggccatacttaaaggagatatcagctcctatgttattaatggattgaca
catagcacagaatatgaagtctccctgtcagctatctttgctgatgaatctgaaagtgat
gctctgtcagccgtggctacaacactgacacggaccactcaggctccaactacagctaga
ccaacaacagcagttgtccgattaggaatcagaaaccttgaaatagatgatgaaaccaca
tctagccttcatgtatcatggaccataactgatgctaatattcgccagtacatcgtgtcc
tacatcaccgcttatggagatcgagaagaagtgaaagtcgtatcgggtcgggaaaatgag
attgtgcttcaatctctgctgtctgacactgagtataaagtcaccgtgactcctgtgtac
ttcaatggagaagggaaccctgtgtctgcttctggaagaacattgccgttgtctgctcca
cggaacctacgagtttctgatgaatggtataacagactgaggataacatgggacccccct
ccttctccaaccctgggctacagaatagtgtacaagccttcaagtggctcgggtccggct
ctggagacttttgtaggcgatgatgtgaacaccatattgattctcaatcttctcagtggg
acagaatacaacttaaaggttctggcatcttattctactggattcagcgatgccttgacc
ggagtgggcaaaacattatatctcggagtgacaaatctaagcgcttatcaagtgaagatg
accagcatctgttcccaatggcagctgcacagacacgcaacttcctacaggatcatcatt
gagtcattgcaggatggctccaagcaagaagctcacctggctggtggaacatctcgtcac
tgtttctatgaacttttgcccaactctaaatacaggatcacggtctatgcacagatgcag
gatgcagaaggacatggtgtcagcattgtggaaacaactctaccagctccaactgcagca
ccgaccagacctccaactcctccaccaacaattcctgtggcacgagaagtgtgtaagtct
gcaagagcagaccttgtattcctggtggacggatcctggagtattggagacgacaacttt
ctcaaagtcatcagattcctgttcagcacagctggagcctttgctgagatcggccctgac
ggaacacaggttggagtcgctcagtacagtgatgatgcaaggacggaatttaaactgaac
tcacacaaaagcaaggagtctctcctggctgccataagtgctatatcttacaaaggaggg
aacacaaaaacaggcagagcgattaagcacgtccgagaagatctgtttaccgcagaagct
ggcatgagaaaaggtgtgcccagggttttggtggtaatcactgatggacgatctcaggat
gaaactgtaaagtttgccaatgagatgcatttggaaggcttcagcatttttgctattggc
gtggcagatgcagactacaacgagttagtgaacattggcagcaagcccagcgagagacac
gtcttctttgtcgatgactttgatgggttcaagaaaatagaagatgagctggtcactttt
atttgcgagacggcgtcagcaacttgtccatgggcctacatccaaggcaacagtgtatca
ggtttcaaaatgatggaaatgtttgggttggtgcaaaaggaatacgccaccttggatggg
gtctcaatggagcctggaacgtttaatgaattcccttgctacaggatacacaaagactct
ctggtgtcccagcctaccaaacatatccatccagagggcctccctacagattataccatc
tccttccttttccgaatactgcccgatacaccgaaggaaccatttgcactttgggaaatc
ttaaacaaggactatgagccattggttggcgtaatacttgacaataatggaaaaactcta
acttttttcaattacgacaataagggacagttccagactattactttcgaaggacccgag
gttaaaaaaatattccatggcagctttcataaggtacacattataattaccacgactaat
tccaggctagtcatcgactgcaaacaaattgcagagaagccaataaacccttccggcaat
atcaccgtggatggtctagaagtcctaggccggatggtgagatcccgaggacccagagac
agctctgctccattccagctgcagatgtttgacattgtatgtacttcaagttgggccact
cgtgataagtgctgcgagcttccagcattgagagatgaagctacctgtcctcctcttcca
aattcctgctcctgcgcccaggagaacaaaggattacaagggcccccaggacctccgggt
ggtgctggtatgaggggacccaaaggatcacaaggtgaaaacggccaacctgggtcagat
ggaccaccaggaccagtaggcccaccaggagctcaaggaccaccaggaccacaggggcca
agtggacattccattcagggaccacctggtcctcctggtttaaaaggagaaagaggagaa
gctggacttcaaggaaatcagggacttcccggatcatccggaattcctggaagagaagga
cctacagggcaaaggggattgccaggaaaagatggctcatctggaccccccggacaccct
ggaccaatgggtgcaccaggtaatccaggatccccaggtgttccaggaggcccaggacgt
cagggtgagactggacccccgggtgctcctggtgtaaaaggggaaaggggagaaagaggg
gacacccagtcacagaacatggtgcgtgcaatcgcccgccaagtgtgtgaacaaattata
cagagtcacatggccaggtttaattcactcctgaaccaaataccaagtcagtctgtatca
gtcagaagtatccccgggcccccaggagagccaggtaaacaaggtccatctggtccacct
ggcgaacaaggatctcctggaagaccaggattccctggcaaccctggctcaccaggaaca
cccggagacagaggtgtaccaggtgaaaagggcgagagaggaaaccctggagtcggaacc
cagggaccgaggggtcctccgggacctacaggaatgcctggtgaaggtcgtactggaagc
caaggtccatctgggcctccaggacagcgtggcctcccaggtcccccaggaactaccggt
cctatggggcctcctggtccacaaggttattgtgatgctgcctcatgtgctggatatggc
ttaataccttacaatgactaccaacgttga
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integrated database retrieval system
