Pyxicephalus adspersus (African bullfrog): 140330791
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Entry
140330791 CDS
T11284
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140330791 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pads01009
]
140330791 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pads04131
]
140330791 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
pads03029
]
140330791 (RB1CC1)
Protein phosphatases and associated proteins [BR:
pads01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140330791 (RB1CC1)
Membrane trafficking [BR:
pads04131
]
Autophagy
Autophagosome formation proteins
ULK complex
140330791 (RB1CC1)
Mitochondrial biogenesis [BR:
pads03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
140330791 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
140330791
NCBI-ProteinID:
XP_072267310
LinkDB
All DBs
Position
5:38776145..38856544
Genome browser
AA seq
1610 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVNDLKHAIQTKYKIAVQQQILVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCDRAPVIPRTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTHSYQKLLFKFENAYSKYLQ
SIDEIKVKLTNLGTAVSVMAKIPLLECLTRHSYRMCLDRLISSTEGDVDELENGKTAELV
QCDDERKLKNMALLASLATSGEHTIQEVRDNRIEQETMESSGQDTEVLEGHLSNEDPLFN
VSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRLTVAKLDNQNMKAIKGL
EDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQLMIMLT
NHRKLLDIKLKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKIQALFRLLMELLERVKI
VEALSTVPQMYCLAVVEVVRRKMFVKHYREWANALVKDGKSLYENEKTKRETFGKLFRKS
YLRNRLFRGLDSWPSSFCTRKPRKFDSELPDISVNDLQFLQSLCPPEVQLFLRVPLLCDF
EPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKVSNGQASPQSVTTPRIESATEATTT
TSSKSSPSLSLQGPVCPTVSIPATLEELSPDSIDAHTFDFETIPHPHIEQSLKQGSLDLD
SLADSPESDFMSAVNEFVIEENPVSPNISDTQSPEMMVESLYSSVINAIDSRRMQDTKGS
KDDSAENLSLKACVDRCKVVAQESQANLRNFKEELCQLKICVQREQSEFASAIKSVSAEI
LKLIEHANVSLETALKKKHFEELQLLEKSYEKRLQLSKEDLNVNEEVLKQLKSDIIVLKD
DLQTKQTEVAAVRNENETFLQLQNERDQKIIHLESVMREQTYEMQKIKDSRETTLEDLKK
LHAEYEEKVRLLKEEFKNLEKTHLKDLEDHLHLRHAQELEDVKVEYKCCIEKLQLENKQK
MDQLQESSAAVAKEKDSQLQQLNLRISELSDTRCKLEVELALKEGEVDEIKLIMEENKAQ
QQDTLNYQVSEQTELLKKEIIQLNNMIKNQKSEHEQGLEELKVLLTMEKEQYISQMLNSH
EAQTKSLQRDNSNLTIAHQQALETESRLREELNILQTKLEDSLKVLEKQTEQHEKALKEQ
KEMYEVSIQKLEEDREQLLSAQKLEKETMPQKFVHEKEDSPNVKDFELHMQTVEKKLSEK
VQLLQEQLSMSSSAVTDSLISELQETLQQGKQLFSEHLDLQEKKKAEELQSLRISLIAEQ
QTNFNTVLTREKVKKENIIGELNEKLKSVTLQQDRDKALIESLSEDRARLLQEKKKLEEE
VGKLQSLMSSAHMVLPSEPAGACAPDPSSEINRPVYDATVIEEDKMEPTLDTSMTAVHDT
LSEEKQKIMLLERTLQLKEEENKRLNQRLDSTRVKISHQPQQKNHEGLPSLFHPFMMSQS
MSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGE
YASGSSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggtgaatactggaaccaccctcacatttgacactgagctt
gctgtacaaacggtgaatgaccttaagcatgccattcagacgaaatacaagattgctgtt
cagcaacagatccttgtagtaaatggtggtgaatgtatggcaccagacaggagggtctgt
agttacagcgctggtactgacacaaatccaatattcctgtttaataaagagatgatattg
tgtgaccgcgctccagttattcccagaacaaccttttcagcagagaatgaaatggaacta
aaggttgaagagtctctcatgatgcctgcagtctttcacacagtcgcctccaggacgcag
cttgcagtggaaatgtatgaggttgccaagaaactttgttcattttgtgaaggtctggtt
catgacgagcatcttcagcaccagggctgggctgccataatggccaacctagaagattgt
acgcactcataccaaaaactgcttttcaagtttgagaatgcctattcaaaatatctacag
tcaatagatgaaattaaagtgaaattaactaatcttggaactgctgtttctgtcatggcc
aagattccgctgctagagtgcctaacacgacacagctataggatgtgtctagataggttg
atatcctctacggaaggggatgttgatgaactagagaatggaaagactgctgaattagtg
caatgtgatgatgaaagaaaacttaaaaacatggctttgctagcttccctcgctacatct
ggggaacatacaatacaggaagtacgtgacaatcgtattgagcaagaaactatggagtct
tctggccaggatacagaagttttggagggacatttgtctaatgaagacccactgtttaat
gtttccctattggactggatcaatgtgcaagatcgtccaaatgatgtggaatcattggtc
aggaaatgttttgactctatgagcagactggatccccgaataattcagccatttttggca
gaatgccgtctaacagttgccaaactggataatcagaatatgaaagccattaaggggctt
gaagatagactttacgcactggatcagatgattgctagctgcagcagattggttaatgaa
caaaaagaacttgctcagggatttttagccaatcagaagcgggctgaaaacttgaaggac
ccttctgtattaccagatttgtgtttgagccatgcaaaccaattaatgataatgttaaca
aaccacagaaaactgctggacatcaagctgaaatgtacgactgccaaacaggagcttgcc
aacaatcttcaagtccgactaaagtggtgctgttttgtaatgctgcatgctgaccaagat
ggggaaaaaattcaggctttattccgacttttaatggagcttcttgaaagggtgaaaata
gttgaggcactaagtacggttcctcaaatgtattgtttggcagtggttgaagtcgtcagg
aggaagatgtttgtaaaacactacagagagtgggcaaatgctttagtaaaagacggtaaa
tcgctttatgaaaatgaaaagacaaaaagggaaacatttggaaaactgtttaggaaatcc
tatctaagaaatcgtctttttcgtggacttgattcttggccttcatctttctgtactcga
aagccaaggaaattcgatagtgagcttcctgatatatctgtaaatgacttacaattttta
cagtcactttgtcctccagaagtgcaacttttcctcagggtacccttactttgtgatttt
gagcctctgcaccagcatgttcgtgctctccacaacctggtgaaagctgcacaaagtttg
gatgaaatgtctcagactattacagatctattaaatgaacaaaaggtgtctaatggtcaa
gcttcacctcagtctgtaactacaccaaggattgaaagtgcaactgaagctacaactact
acctcatccaaatcctctccatcacttagtcttcagggtcccgtttgtcccactgtctcc
attccagcaactctggaggagttgtctccagatagcatcgatgctcatacctttgatttt
gaaactattccccatccacatatcgagcaatcacttaaacagggttccttggacctggac
tcgttagcagatagtcctgaatctgattttatgtctgctgtcaatgaatttgttatagaa
gaaaatcctgtgtcgcctaacatcagtgatacacaaagtccagaaatgatggttgagtca
ctatattcatcagtcataaacgcaattgacagtaggcggatgcaggacacaaaaggtagt
aaagatgacagtgccgaaaacttatctttaaaagcttgtgttgacagatgcaaagttgtt
gctcaagaatcacaagccaatttgcgcaattttaaagaagagctttgccaattaaagatt
tgtgtccaaagggagcagagtgaatttgcaagtgctattaaatctgtttctgcagagatc
ctaaaactgattgaacatgcaaacgtttctcttgaaactgcattgaaaaagaaacatttt
gaagaattgcagcttttagaaaaatcttatgaaaagcgactgcagctatcaaaggaagac
cttaatgtaaatgaggaagtcctaaaacagttaaaaagtgatattatagtactaaaagat
gatttgcaaacaaaacaaacagaagttgctgctgtcagaaatgagaatgaaacatttctt
caattacaaaatgaaagagatcagaaaataatccatcttgaaagtgtcatgagggaacaa
acttatgaaatgcagaagataaaagattcccgggaaacaaccttagaggacttaaaaaaa
cttcatgctgaatatgaagaaaaagtcagacttctcaaagaggagtttaaaaatttagag
aaaacacacctcaaagatttagaagatcatttacatctcaggcatgcacaagaacttgaa
gatgtaaaagtggagtataaatgttgcatagaaaaactgcagttagaaaataagcaaaaa
atggaccaattgcaggaatcttctgcagctgttgcaaaggaaaaagactcccaacttcaa
caactaaaccttagaatttctgaactttctgatactaggtgtaaattagaagttgaattg
gcactcaaagagggggaagttgatgaaataaaattaattatggaagaaaataaagcacag
cagcaggacaccttgaattaccaagtcagtgaacaaacggaattactaaaaaaggagatt
attcaattaaataacatgataaaaaatcagaaaagtgaacatgagcagggactggaagag
ctcaaagtattattaacaatggaaaaagagcaatatatttctcagatgctgaatagtcac
gaagcgcaaaccaaatcattacaaagagacaatagtaatttgaccattgcccatcagcaa
gcattggaaacagaaagtaggcttcgggaggaactaaatatcctacagactaaattagaa
gacagtttaaaagtacttgaaaaacaaactgagcagcatgaaaaggctttaaaggagcaa
aaagaaatgtatgaagtatctatacaaaaacttgaagaagatcgagaacagctgttgtct
gcacaaaagcttgaaaaggaaactatgccacagaaatttgtacatgaaaaagaagattcg
cccaatgttaaagattttgagttgcatatgcaaactgttgaaaaaaagctctcagaaaaa
gtacagctccttcaagagcagttaagtatgagttcctctgcagtcacagacagtttgatc
tctgaacttcaggagacacttcagcaaggaaaacagctatttagtgagcatcttgacctg
caggagaaaaagaaggctgaagaacttcagagcctcaggatatccctgattgcagagcag
cagacaaactttaacactgttttgacaagagagaaagtgaagaaagagaatataattggt
gagctcaatgagaaattgaagagtgttacactacagcaagacagagataaggctttaatt
gaatccctatctgaagaccgtgcacgtttactacaagagaagaagaaacttgaagaagaa
gttggcaagcttcagagtcttatgtcttcagctcacatggttttaccttccgagcctgct
ggagcatgtgcacctgacccttctagtgaaataaatagaccagtttatgatgccactgtt
atagaggaggataaaatggagcccactttagataccagcatgacagctgttcatgatact
ttatctgaagaaaaacagaagataatgctgctagagagaacactgcagttgaaagaagaa
gaaaataaacgactgaatcagaggctggattctaccagagtcaagatctcccatcaacct
caacagaagaatcatgaagggctgccaagtcttttccatccttttatgatgtcacagagc
atgtcttcagtttcctcaagacattcagagaaaatagctattcgagacttccaggttgga
gatttggtccttattatcttagatgaacgtcatgacaattacgtcctgtttacagtcagc
ccaacactatattttttgcattcagagtcattggctgcattagaccttaaaccaggtgag
tatgcctccggatcatctagaagaccctgggttcttgggaaagtgatggaaaaagaatat
tgccaagccaaaaaggcccaaaaccggtttaaagttccactggggacaaaattctatcga
gtgaaagcagtgccatggaataagaaagtctaa
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integrated database retrieval system
