Pyxicephalus adspersus (African bullfrog): 140330837
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Entry
140330837 CDS
T11284
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pads04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
140330837 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
140330837 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pads02000
]
140330837 (NPC1)
Transporters [BR:
pads02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
140330837 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
140330837
NCBI-ProteinID:
XP_072267414
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All DBs
Position
5:44424966..44466619
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AA seq
1282 aa
AA seq
DB search
MGGSKLLSIVTLCLLLATHLPTEVSSQHCVWYGECGEAEGGKRYNCEYLGPPIPLPEEGH
DLLQQLCPSLYYGNVSVCCDIQQLKTLNNNLQLPLQFLSRCPSCFFNLMTLFCELTCSPR
QSEFLNVTGTIDYIKPDVTKENKSIITMDYYIGESFSNAMYNACKDVEAPSSNVKALGLM
CGREAKDCNATNWIQYMFNKDNGQIPFTITPYFSDEPLHQMIPMNNATKGCNESVDEDGA
HCSCQDCTLVCGSRPVPPPPPEPWLLFGFDAMVVIMWISYGAFLLLFCSAVIGAWCYRKK
RIVSEYAPIDSTLAYSVNYTTVSGEPSCCDRIGERLENCLRVAFTKWGSFCVRHPWIVIF
CSLALIAVCCTGLKFMRITTDPVELWSDPHSQARREKDYFDTHFGPFFRTEQLIITAPNS
SGEIYSPYPSGDDVPFGPPLTFDILTQVLELQNSIESITASYNNETVMLKDICLAPLAPY
NNNCTILSVLNYFQNSYSVLNHSVSDEFFVIADYHTHFLYCVQSPASLNDTSALHDPCLG
TFGGPIFPWLVLGGYDGENYNNATALVITFPVNNYHNDTEKINKVRAWEKEFIKFMKNYN
NSNLSISFSAERSIEDEINRESSSDVITVLISYALMFLYISLALGHVSQCNRILVESKIS
LGIAGILIVLSSVACSLGIFSYAGIPLTLIVIEVIPFLVLAVGVDNIYIIVQTLQRDERL
QNEKLDQQIGRILGDVAPSIFLSAFSETVAFFLGALSSMPAVRTFSLFAGMAVFLDFLLQ
ITFFVSLLGLDIKRQEKDRLDILCCVPGCKKNRSTDKRKSCLFLFFKKIHAPLLMNDWMR
PIVMSVFVGILSFSIAVVNKVEIGLDQSLSMPDDSYVLKYFESLNKYLHTGAPVYFVVEE
GHDYKTKEGQAMVCGGAGCNNNSLVQQIYNAAQLDNYTKIGYAPSSWLDDYFDWVKPQST
CCRVYNESEKFCNASVVDPSCHRCRNLTTEGKRKPVGEDFMKFLPMYLSDNPNPKCGKGG
HAAYSTAVDLISNGTDVGATYFMTYHTILHDSSDFIDAMRKAQVIAKNITDSIDVPGKNY
RVFAYSVFYVFYEQYLTIVDDTVFNLCLSLAAIFFVTVILLGFEIWSSVLMCLTISMILV
NMFGVMWLWNISLNAVSLVNLVMCCGISVEFCSHITRAFSISTKGSRAQRAQDALAHMGS
SVFSGITLTKFLGIGIMGLSKSQIFKIFYFRMYLSMVLLGAAHGLIFLPVLLSYIGPQVN
KAKVQAARERIRGTEQERLLVH
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggggggatcgaagcttctctccatagtaaccctctgcctgctcctggctactcacctc
cctaccgaggtttcttcccagcactgtgtctggtatggggaatgtggtgaagcagaaggt
ggcaagcggtacaactgtgaatacctcggtcctccaattcccttacctgaggagggccat
gacttactacagcaactgtgcccatccttgtactatggcaatgtcagcgtgtgctgtgat
atacaacagctcaaaactctgaacaacaacctacagcttcctctacaatttttgtccagg
tgtccttcctgcttttttaatttaatgactttgttctgtgagctgacatgcagtcctcgt
cagtcagagtttctgaatgttactgggaccatagactatatcaagccagatgtaaccaaa
gagaacaaaagcatcattaccatggattactacattggagaaagtttttcaaatgcaatg
tacaatgcctgcaaggatgtagaagctccatccagtaacgttaaagctttgggattgatg
tgtggaagagaagccaaagactgcaatgccaccaactggattcagtacatgtttaacaag
gataacggacagattcctttcaccatcacaccttatttctcagatgagccattacaccag
atgattcccatgaacaatgccacaaagggatgcaatgagtctgtagatgaagatggtgcc
cattgcagttgtcaggactgtactctggtctgtggcagtagaccagtacctccacctcct
ccagaaccctggcttctctttggctttgatgccatggttgtaatcatgtggatatcctat
ggtgcatttttacttttattctgctctgctgtcattggagcttggtgttacagaaaaaag
aggatagtttctgaatatgctccgattgacagcaccctggcatattctgtaaattacact
actgtatcaggcgaaccatcatgctgtgacagaattggggagcgcctggagaactgtctg
agggttgctttcaccaaatggggttctttctgtgtccgacacccttggattgtcatcttc
tgttcactggctttgattgctgtgtgttgcactggactaaaattcatgcgtattactact
gaccctgtagaactgtggtctgacccacacagtcaggcacgcagagaaaaggattatttt
gatacacactttggacccttcttccgcacagagcagctcatcatcactgcgcctaacagc
tcaggagaaatctactccccatatccatccggggatgatgtgccttttgggcctccttta
acctttgatattctcacccaggttttggagttacaaaattccattgagagcataactgcc
agctacaataatgagactgtgatgctaaaggacatctgcctggctccactggcaccatac
aataacaactgtacaatcctcagtgtcctgaactatttccagaacagctattctgtgttg
aatcacagcgtgagtgatgagttctttgttattgcggattaccacactcacttcctatac
tgtgtgcagtcaccagcttctctgaatgacacttctgcacttcatgatccatgcctgggc
acttttggtggcccaatctttccatggcttgttcttggaggctatgatggagagaattat
aacaacgctacagcacttgtgattaccttcccggtgaataactatcacaatgacaccgag
aagataaacaaggtccgggcctgggagaaagaatttatcaaatttatgaaaaactacaac
aactccaatttatctatctcattctctgctgagaggagtattgaagatgagattaacagg
gaaagtagtagtgatgtgatcactgtccttatcagctacgctttgatgtttctctacatc
tcgctggccctgggccatgtcagccagtgtaaccgcattttggtggagtccaagatctcc
ctcggtattgctggtatccttattgtgctgagctccgttgcatgctccctgggtatcttc
agctatgcgggcattccactcactctcattgttattgaggtcatcccattcctggttcta
gcagttggagtggacaacatatatatcattgtgcagaccttacagagagatgaacgtttg
cagaatgagaagcttgatcagcagattggcagaatcctgggggacgttgccccgagcata
ttcttgtctgcgttttctgagactgtggcctttttcttgggggcattgtccagtatgccg
gctgtacgcacattttcactgtttgctggaatggccgtcttcctggatttcttgcttcag
atcactttctttgtgagccttttgggattggatatcaaacgtcaagagaaagacaggctg
gacatcctctgctgtgtcccaggatgtaagaagaatcgcagtacagacaaacgaaagagc
tgtcttttcctgttcttcaagaagatccatgcccctctgctaatgaacgattggatgcgg
cctatagtgatgtcagtctttgtgggaattctctcctttagcattgctgtggtcaataaa
gtcgaaattggtttggatcagtccctgtcaatgccagatgattcctatgtactgaaatac
tttgagtccctgaataaatacctacacaccggtgctccagtgtattttgtggtggaagaa
ggacatgactataaaacaaaggaggggcaggctatggtgtgcggtggggcaggatgcaac
aacaactcattggttcaacagatttacaatgctgcacaattagacaactacacaaaaata
ggctatgctccttcctcttggctggatgattactttgactgggtgaaacctcaatcaacg
tgttgtcgtgtgtataacgaatctgaaaagttttgcaatgcttcagttgtggacccatcc
tgccatcgctgtcgaaatcttacaacggaaggtaaacggaagccagtaggagaggatttc
atgaaatttctgccaatgtacctctcagacaatccgaacccgaaatgtgggaaaggtgga
catgctgcatacagcactgctgtagacctcatatccaatggtacagatgtgggagctact
tactttatgacttaccacaccatcctacatgactcctcggacttcatcgatgccatgcga
aaagcacaagtaatagccaagaatatcactgacagcatagatgtccctggcaaaaattac
agagtgtttgcttacagtgttttctatgtgttctatgaacaatacctaaccattgtggat
gatacagtgttcaacctttgcctgtcgttggctgcaatcttctttgtgactgtcattctt
ctgggcttcgagatctggtcctccgtcctgatgtgtcttaccatctccatgatcctcgtc
aatatgtttggagtcatgtggctctggaacatcagcctgaacgctgtgtctctagtgaat
ttagtcatgtgttgtggcatttctgtggagttctgcagccatataactagagccttctcc
atcagcaccaagggaagccgagcacagcgtgcacaggatgccttggcacacatgggaagt
tcggtcttcagtggaattactctgacaaagtttctgggaatcggcatcatgggcttgtcc
aagtctcagatattcaagattttctacttcaggatgtacttatctatggtgcttcttggt
gcagctcatggcctaatatttctgccagttcttcttagttacatagggccacaagtgaac
aaagccaaggttcaagcagcacgagaaagaataagaggcacagaacaagaacgccttctt
gtccactaa
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