Pyxicephalus adspersus (African bullfrog): 140330989
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Entry
140330989 CDS
T11284
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140330989 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pads04121
]
140330989 (NHLRC1)
Enzymes [BR:
pads01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140330989 (NHLRC1)
Ubiquitin system [BR:
pads04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140330989 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
SdiA-regulated
zf-C3HC4_2
Baculo_IE-1
zf-RING_11
zf-C3HC4_4
Prok-RING_4
RING_XB3-XBAT31
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
140330989
NCBI-ProteinID:
XP_072267740
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All DBs
Position
5:59552069..59555060
Genome browser
AA seq
399 aa
AA seq
DB search
MSSSSQKEIRTMKDFLDETEINLLECKVCFEKYSQQQRHRPRNLPCGHIICQDCVSSLLN
PGNSKLECPFCRKGCRKSETSVCLPVLHLLEIIGRVVPDHPERRFADCRSNQVAKLKSAS
FKLSASFGGWGVLFNPTGIAFCYSTGCLLVVHDGKKRLSRFTMNGNLVHEMGEKSSSENG
LVYAVSVAVTLDGFVAVTDAGDRSLKVYSPAGKRTLIVKKPFLLPWGLAVNAENEVIVSD
PDGSSLVLVAANFSQGGIKKTVNICSNLNQPKEIAVCQTNGSVIVVEHLAKDNKNSSSTR
IKILNNNMRLLRQIDSFNLSLFLPLDVHTSGVAFDHEGNILVADVNNRCVICLNKIEEGN
GLKHVVASGLSYPVAIAVIEDGSIAVLDSGNHSVLVYSP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctcatcacagaaagaaatcaggactatgaaggattttttggatgaaactgaa
attaacttacttgaatgcaaggtttgttttgaaaaatacagccagcaacaaaggcatagg
cccaggaaccttccttgtggccacatcatatgtcaggattgtgtgtcgtctcttctaaac
cctggaaactcaaagctagaatgtcctttctgccgcaaaggttgcaggaagtctgagact
agtgtgtgcctccctgtcctacacctcctggagatcatagggcgcgtggttcctgatcat
ccagaaagaagatttgcagattgtagaagtaatcaagtagcaaaactgaaatctgcaagt
tttaaactgagcgcatcttttggcggctggggcgtgcttttcaaccctactggtattgca
ttctgttacagcaccggttgtttgcttgtggtacacgatgggaaaaaaagactttcaaga
tttacaatgaatggaaatttagttcatgaaatgggtgagaagtccagttctgaaaatggc
ctagtgtatgcagtcagtgtggcggtcaccctggatggatttgttgcagtgacagatgca
ggcgatcggtcactaaaggtgtacagtccagctggaaaacgcactttgattgttaaaaaa
cctttcctcttgccttggggcttagctgtaaatgctgaaaacgaagtcatagtttctgac
ccagatggtagcagccttgttcttgtagctgccaactttagccaaggtggcatcaagaaa
accgttaacatatgttctaacctaaaccagcccaaggaaattgcagtctgccaaacaaat
ggatcggttattgtggtcgaacacctggcaaaggacaacaaaaattcttccagtactaga
attaagattttaaataataatatgaggctcttaagacaaattgatagttttaatttgagc
ctttttctgccgttagatgtacacacatctggagtggccttcgatcatgaaggaaatatt
ttagtagcggatgtaaataacagatgtgtaatttgcttgaacaaaatagaggaaggcaat
ggcttaaagcatgttgttgccagtggcctttcatacccagtggcaatagccgtaatagaa
gatggctccattgctgttctggatagcggaaaccactctgtgctagtttattctccataa
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