Pyxicephalus adspersus (African bullfrog): 140331104
Help
Entry
140331104 CDS
T11284
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140331104 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140331104 (DROSHA)
03009 Ribosome biogenesis [BR:
pads03009
]
140331104 (DROSHA)
03036 Chromosome and associated proteins [BR:
pads03036
]
140331104 (DROSHA)
Enzymes [BR:
pads01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
140331104 (DROSHA)
Messenger RNA biogenesis [BR:
pads03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
140331104 (DROSHA)
Ribosome biogenesis [BR:
pads03009
]
Eukaryotic type
90S particles
RNase
140331104 (DROSHA)
Prokaryotic type
rRNA processing factors
140331104 (DROSHA)
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
140331104 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
140331104
NCBI-ProteinID:
XP_072267943
LinkDB
All DBs
Position
5:68145138..68302631
Genome browser
AA seq
1327 aa
AA seq
DB search
MSLHTGRGGPQTRTGTGTPVQAYRPQNVRPAQMQQSSGQYCYDPQSTPPPTFSSLPNTSY
IPPRPDYMCYPPPVAPPTQSTVNQCLPRPTYPIRQSYPMPPCFPPAPPSTLGPGNPPPTG
PPTAQGTYPYIAPTLMPPPPPIMPPPLPHVGYQTVYPGYPPQAFPPPPPPPQPVPSFNSY
QQNSASFQGSSHYRHTSHSPYQTDKPQSDHRTQDRSKHYDSHRHRDYNHSDRHRSEKHSD
RRDRGRSPDRSRRPDSSRRRSEYEYSRNAFHGRTSPRHGSYERSRERHRHRDSRRSPTPE
RSYRKRQKSTSPSTERRRPRWEDDPKDSTSENPSSGKEKNCISVKDKDLLDEGMLDRAEE
EDDDLLKPVWVRCTHSESYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGKRQTKARAA
RPAWEPPKTKLDEDFDSSSDSECDTDDDSCSSSSDSEVFDVIAEIKRKKAHPDRLHEELW
YNDPGQMNDGPLCKCSAKARNTGIRHSFYPGEESIKACRPMTNNAGRLFHYRITVSPPTN
FLTDRPTVIEYDDHEYIFEGFSMFSHAPLTNIPLCKVIRFNIDYTIHFIEEMMPEHFCVK
GLELFSSYLFRDILELHDWNLIGPTSEDNSAVCPQFHFMPRFVRFLPDGGKEVLSMHQVL
LYLIRSNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPVMKPSSVRIDQLDREQFN
PEVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLVQREE
ALQKIRQKNTMRREVTVELSSQGFWKSGIRSDVCQHAMMLPVLTHHIRYHKCLMHLDQLT
GYVFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHYMHMRKKGIN
TLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYFLFPNLEEGGLATYRTAI
VQNQHLAMLAEKLELDRFMLYAHGPDLCRESDLRHAMANCFEALMGAVYYEGGLEEAKQL
FGRLLFGTQDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLKKLTKFEEAIGVEFTHIRL
LARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPGHHEGHLTLLRSSLVN
NRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNV
CFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVY
FKGERIGCGKGPSIQQAEMQAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRLEKEQQE
NTEDVRK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgcatacagggagaggaggaccacagacccgaacaggcactggaactccagtg
caggcatatcggccacaaaatgtaaggccggctcagatgcagcaatcttctgggcagtat
tgctatgacccacaaagtactccacctcctacattttccagccttcctaacaccagttat
atacctccgagaccagattacatgtgttatcctccacctgttgcaccacctacccaaagt
acagtaaaccaatgtctgccaagaccaacttatcctatccggcaaagttaccccatgcca
ccttgttttcctcctgctccaccatctacacttggccccggaaatccaccgcccactgga
ccacctactgcacaaggcacttacccctacattgctccaactcttatgccgccgccacca
cctattatgcctcctccattaccccatgtgggttatcagacagtgtaccctggatatcca
ccccaggcttttcctccacctccacctcctccacaacctgttcctagcttcaatagctat
cagcagaattcagcctcttttcaaggcagtagccactacagacacacaagtcacagtcca
tatcaaaccgataaaccgcaaagtgatcatcgaacacaggacagaagcaaacattatgat
tctcaccgccatagagactataatcacagtgatagacaccgctcagagaaacatagcgat
cgaagagatcggggaaggagccctgaccgttcaaggcggccggatagtagtcgacggaga
tcggagtatgagtacagtaggaatgcatttcatggcagaacttcaccacgtcatggaagt
tatgaacgtagcagggagcgtcacagacatcgggatagtcgaagatcgccaactcctgaa
agaagctataggaaaagacaaaaaagcacatcccctagcacagagcgaaggagacctaga
tgggaggatgaccctaaggacagcacttctgaaaacccctcttctgggaaggaaaaaaat
tgcatttctgtaaaagacaaagatttattggatgaaggcatgctggatagagccgaggaa
gaggatgacgatttgttaaagccagtgtgggttcgctgtactcattcggaaagctattat
tccagcgacccaatggatcaagttggcgactccactgtggttggaacaagcaggttacgg
gatttatacgacaagtttgaagaggaacttggcaagcgtcagacaaaagctagagctgct
aggcctgcgtgggagccaccaaagaccaaattagacgaagattttgatagctccagtgat
tcggaatgtgatacggatgatgatagctgttccagcagctcagactctgaagtgtttgac
gtgattgcagaaataaagaggaagaaagctcatcctgaccgtcttcatgaagagctatgg
tataatgatcctggccagatgaatgatggccccctgtgtaagtgcagcgctaaagccagg
aatacaggaatcagacacagcttttatcctggagaggagtcaataaaagcatgtcgtcca
atgacaaacaatgcaggacgtctctttcactacaggattactgtgtcgccaccaaccaat
ttcttaactgatcgacctactgttatagagtacgacgatcatgaatacatctttgaagga
ttctccatgttttcccatgctccccttacaaatattcccctgtgcaaagtaatccggttt
aacattgactacacaattcatttcattgaggaaatgatgcctgagcatttctgtgtgaag
ggacttgaactgttttcctcctacctgttcagggacatattagagcttcatgactggaat
cttattgggccaacttctgaagataacagtgctgtgtgtccacaatttcatttcatgcct
cgatttgtaagatttctgccagatggcgggaaagaagttctttctatgcaccaagtattg
ttgtacttaattcgaagtaacaaggctttggttccagaggaagaaattgcaaatatgctt
caatgggaggaactggaatggcagaaatatgcagaagagtgcaaaggaatgattgtcact
aatccagtaatgaaacctagctcagttcgaattgatcagcttgaccgcgaacaatttaac
ccagaagtgattactttccctattattgtacattttggaatacggcctgcccagctcagt
tatgctggtgatccacagtatcagaaactgtggaaaagttatgtgaagttacgccatcta
ttggccaacagtccgaaagtcaaacaagcagataagcagaaattggtccagagggaggaa
gctcttcagaagatcagacagaagaacacaatgaggcgtgaagtaacagtagaactcagt
agccagggtttttggaaaagtggcattcgctcggatgtctgccagcatgctatgatgctt
ccagtgctgacccaccacatccgctatcacaaatgcctgatgcatttagatcaattaact
ggatatgtgtttagggatcgctgcctgctgcagcttgcaatgactcatccaagccaccat
ttaaattttgggatgaaccctgaccatgcccgcaactctctttccaattgcggcattaga
cagcctaaatatggggatagaaaagttcattatatgcacatgcgtaaaaaaggaataaat
acgctgataaacattatgtctcgtctggggcaagatgatccagccccttcacgaatcaac
cacaatgagcgcttggaattcttaggagatgctgtggttgaatttttaacaagcgtccac
ctgtacttcttatttcccaacctagaagaaggaggactggccacatatcggacggctatt
gttcaaaatcagcaccttgccatgctggccgagaaactagaactggatcgtttcatgctg
tacgcacatggaccagacctgtgtagagaatcagatttgcggcatgccatggcaaactgc
tttgaagctctgatgggtgctgtatactatgaaggtggacttgaagaggcaaagcagtta
tttggaaggttgctatttggtactcaggatctgcgggacgtgtggcttaattatcctcta
cacccacttcaacttcaggagtctaacaccgatcgacagctgattgagacatcaccggtc
cttaagaagctgacaaaatttgaagaagctattggagttgagtttactcatatacggctt
ctagctcgagctttcaccttgagaacagtgggatttaaccatctgaccttaggccacaac
caaaggatggaattcctgggtgactccataatgcagctggtagccaccgaatatttattc
atacatttccccggtcatcacgagggccacttaacgctgctgcgtagttcactggtgaac
aacaggacacaggccaaggtagcggaggagctgggtatgcaggagtttgccatcacaaat
gataaaacaaagagacctgttgctctccggaccaagactttggcagatttattggaatcc
tttattgcggcactttatatcgataaggacctggaatacgttcacacttttatgaatgtg
tgcttctttccacgactaaaggagtttattctaaatcaagactggaatgatcctaaatct
caacttcagcaatgctgtttgactttaagaacagaaggaaaagagccagatatccctttg
tacaagacccttcagactgtgggcccttcccatgcaagaacctacacagttgccgtgtac
ttcaaaggagagcgaattggctgtggtaaaggaccaagcattcagcaggctgagatgcaa
gctgctatggacgccttggagaaatataacttcccccagatggctcatcagaagcgtttt
atcgaacggaagtaccggcaggaattgaaagaaatgaggttggagaaggagcaacaagag
aacacggaagacgtgagaaaataa
DBGET
integrated database retrieval system
