KEGG   Pyxicephalus adspersus (African bullfrog): 140331179
Entry
140331179         CDS       T11284                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pads  Pyxicephalus adspersus (African bullfrog)
Pathway
pads04382  Cornified envelope formation
pads04510  Focal adhesion
pads04512  ECM-receptor interaction
pads04518  Integrin signaling
pads04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pads00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    140331179 (COL4A2)
   04518 Integrin signaling
    140331179 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    140331179 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    140331179 (COL4A2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    140331179 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pads04147]
    140331179 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:pads00536]
    140331179 (COL4A2)
Exosome [BR:pads04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   140331179 (COL4A2)
Glycosaminoglycan binding proteins [BR:pads00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   140331179 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 140331179
NCBI-ProteinID: XP_072268062
LinkDB
Position
1:64587675..64694046
AA seq 1737 aa
METSENRKRCPRLHPLWKQNCLPWALMLVVLVLGFSRSVDAGGKSYTGPCGGRDCSGGCQ
CLPEKGSRGQPGQLGAQGPVGPHGVTGIAGLPGRKGDKGERGQPGIHGPTGDKGQNGVTG
FPGADGVPGHVGQAGSRGKPGHDGCNGTKGDAGEAGRQGPRGPLGYLGYPGVKGQKGEPF
YVPEDMKNKLRGEPGEPGLAGYPGPIGRPGRAGFIGPVGEPGLPGPAGPSGPLGPPGSKG
IGFYGQKGEQGEQGKPGPPGLPCQIQGEPGTGPTGAPCHLELVKPSDTTIVDYLAEKGEK
GERGDLGKPGEDALSGEHGEEGIMGFPGARGPAGNDGAPGDKGEIGLPGLNGNPGISGFK
GLKGEHGERGAPGPPTYVTSFTVQKGENGDRGFPGNVGPDGETGDKGSPGLPGLMGSPSP
FPGPPGFPGLKGERGQKGFQGEPGLPAFQKGRDGDPGDPGLRGPPGLPGYPGGRIGRKGA
KGSPGNDGSDGYPGFAGLKGLKGEQGECKCSAGDEVTVGPAGDPGPVGFPGPDGEIGPKG
EQGDRGVPGLPGAPGIKGLPGFNGLPGPVGEKGDTVFATEKGAKGERGTPGVPGTPGFEG
FPGKNGSFGIPGPPGPPGDAEKGLIGEPGSAGPPGPEGAQGEPGLPGLGLPGPKGARGVP
GQPGRSGSPGIPGFPGLPGDCFKEPGEDNGVGQRPIFPGFGCTLTPPPAPAGTRGPPGLP
GYNGVRGVKGQPGQQGADGIPGFKGLRGDPGPDSLPGPQGFPGRRGDRGKPGAPGLPGGP
GPSGKPGAQGFQGTKGSSGDVLGAPSGSRGDVGFPGFPGLKGIQGDTGLPGFRGINGRPG
TPGQKGIPGDSGIPGTPGLPGPSGNGGFPGMQGKTGKPGLAGLSGLPGSSGPRGDEGEQG
NPGKSWKKGEAGDVGDVGTTGIRGRIGDPGFPGLTGMDGHPGVKGAKGSSGMGGFQGMKG
EKGQPATSGPRGQFGDVGLPGERGIPGAIGQKGTRGEDGPPGPPPQIEKEMMQKMKGEKG
SQGVPGFSGVPGFIGEKGMPGHPGKPGQPGLPGMPSFEQGDKGNTGESGFIGFPGTPGQV
GPPGIRGFPGFTGPRGLKGMPGLYGITGDRGDTGDKGDRGYSIDLPGERGSKGVIGDPGF
PGQSGRPGEKGLAGDAGFPGIAGMKGHIGEPGQRGQTGLPGLLGLPGAQGDPGIPGIHGE
KGSPGIPGLPGQQGFPGLRGFSGNDGLKGSKGLQGPAGLDVYGVSGVKGTPGQKGDQGEQ
STVAGLPGNTGMKGARGEPGLPGLTGLPGLNGVRGLPGASNVSGIPGDIGSSGLTGQPGY
PGPQGRPGIPSRPGVKGEPGPHGLQGVIGVRGVPGDRGVQGLTGITGYAGEKGHKGQQGI
DGAFGLPGFPGDRGPKGPKGDRGETGLQGEPGSPGLPALPLRVDVDPGPIGVMGVIGPRG
IQGDMGPQGLVGDKGTQGPQGKQGVPGIPGRSAAPGSIGDHGPMGQRGPEGYKGTPGVPG
SAGLQGMPGRSVNIGYLLVKHSQTDQEPMCPIGMAKLWSGYSLLYFEGQEKAHNQDLGLA
GSCLQRFSTMPFLYCNPGDLCYYASRNDKSYWLSTTAPLPMMPVVEDEIEPYISRCTVCE
APAVAIAVHSQDSSIPFCPVGWRSLWIGYSFLMHTAAGDEGGGQSLSSPGSCLEDFRATP
FIECNGARGTCHYFANKYSFWLTTIDNDFQGSPSSDTLKAGLIRTHISRCQVCMKNL
NT seq 5214 nt   +upstreamnt  +downstreamnt
atggaaacatctgaaaacaggaagcgatgcccaaggttgcatccattatggaagcaaaat
tgtttgccatgggctctgatgttggttgtactggtactaggattttccagaagtgttgat
gctggtggaaagtcttacactggaccatgtggaggaagagactgcagcggaggatgtcag
tgtttgccagagaagggcagccgtggacaacctggacaacttggtgcacaaggtcctgtt
gggccacatggtgtcactggaatagctggcttaccaggacgtaaaggagacaaaggtgaa
agaggtcagccaggcattcatggaccaactggagataagggacaaaatggagtaacaggt
tttccaggagccgacggtgtgcctggccacgttgggcaagctggttcaagaggaaagcca
gggcatgatggttgcaatggaacaaaaggtgatgctggtgaagcaggccgtcagggccca
agaggaccgttggggtatttgggttacccaggtgtcaaaggtcagaaaggagaacctttc
tatgtaccagaagatatgaaaaataaattaagaggtgaacctggtgaacctggattagca
ggatacccaggtcctattggtcgaccaggaagagcgggattcattggtccagttggagaa
cctgggttgcctgggccagcaggaccatctggaccactaggaccacctggcagcaaaggg
attggcttttatggacagaaaggagaacagggcgaacagggcaagccaggacccccaggc
cttccatgccagatacagggtgaacctggaacaggaccaactggtgcaccatgccactta
gagctggtaaagccatccgataccactatagtagattatctggctgaaaaaggtgaaaaa
ggagagaggggtgacttagggaaaccaggtgaagacgctttatcaggagagcatggagaa
gaaggtattatgggcttcccaggagcaaggggacctgctggaaatgatggtgcacctggt
gacaaaggtgaaattggattgcctggactgaatggtaatcctgggatatctggttttaaa
ggattaaagggagaacatggtgaaagaggtgctcctgggccaccaacctatgttacaagt
tttacagtacagaaaggagaaaatggagatagaggattccctggcaatgttggtcctgat
ggggagactggtgataaaggaagtcctggtctaccaggtttaatgggatcacccagccct
ttcccaggtccaccaggatttcctggcctaaaaggtgaaagaggtcaaaaaggatttcaa
ggagaaccaggattacctgcctttcaaaaagggagagatggagatccaggagatcctggc
ctacgaggacctcctggtttaccagggtatccaggtggacgtattggaagaaaaggtgct
aaaggatcaccaggaaatgatggatcagatggatatcctggatttgctggtttgaaaggg
cttaaaggtgaacagggtgaatgtaaatgttctgctggtgatgaagttacagtgggacct
gctggggatccgggccctgttggctttcctggccctgatggtgaaataggtcctaaaggt
gaacagggggataggggagttcctggtcttccaggtgcacctggtattaagggacttcca
ggatttaatggtcttcctggtcctgtcggtgagaaaggagacacagtgtttgctactgaa
aaaggtgcaaaaggtgagagaggaacccctggtgtcccaggcactccaggatttgaagga
tttccaggaaagaatggatcatttggtattccaggtcccccaggtcctcctggtgatgct
gagaaaggactaataggagagcctggatctgcaggccctccaggtcctgaaggagctcag
ggtgagcctgggctaccaggtttaggattaccagggccaaagggtgcacgtggtgttcct
ggacagccaggtcgtagcggatccccgggaattccaggatttccgggattaccaggtgac
tgctttaaggaacccggtgaagacaatggagttggccaaagacctatttttccaggcttt
gggtgcacgttaaccccaccacctgctccagcgggaaccagaggtcctccaggattacca
ggatataatggtgtaagaggtgttaaaggtcaaccaggtcaacaaggtgcagatggaatc
ccaggttttaaaggactcagaggtgaccctggacctgacagtctgcctggcccacaagga
ttcccaggtcgaagaggagatcgtggtaagcctggagcaccaggtctaccaggaggacct
ggcccatcagggaagccaggtgcacaaggattccaaggaactaaaggaagctctggtgat
gtgttgggagctccatctggatcccggggcgatgttggatttcctggttttccaggtctg
aaaggcatacaaggagatacaggcttaccaggatttagaggtatcaatggaagacctggt
actccaggacaaaaaggtattccaggtgattctggaattcctggaactcctggattacca
ggcccatcaggaaatggcgggtttccaggaatgcaagggaagacgggaaagccaggatta
gctggcctctcaggacttccaggttcttctggaccccgaggtgatgaaggcgaacaaggg
aacccaggaaagtcttggaaaaaaggggaagctggagatgtgggagatgtgggaactact
ggcataagaggaagaattggagatccaggcttccctgggttgactggtatggatggccat
cctggtgtcaaaggagcaaagggttcttctggaatgggaggtttccaaggaatgaagggt
gagaaaggacagcctgccacaagtggtccccggggtcagtttggcgatgttggcttacca
ggagaaagaggaattccaggagcaataggccagaaaggtactcgaggagaggatggacca
ccaggaccaccaccgcaaattgagaaagaaatgatgcaaaaaatgaagggagagaaagga
agtcaaggtgttccaggattttcaggagttcctgggtttataggggaaaagggaatgcct
ggacaccctggaaaacctggtcaacccggtttacctggaatgccaagctttgagcaaggg
gataaaggaaatactggagaaagtgggtttattggttttcctggtactccagggcaggtt
ggtcctcctggcattcgtggatttccaggatttacaggtcctagaggtttgaagggtatg
cccggtttgtatggaattacaggtgacagaggagatactggagataaaggtgatagagga
tattctatagatttgccaggagagagaggaagcaagggtgtgataggtgaccctgggttt
ccaggacaaagcggaagacctggagaaaaaggattggcaggagatgcaggttttcctggt
attgcaggaatgaaaggacatattggagaaccaggacaaaggggccaaactggtttacct
ggtttgttgggcctacctggagctcaaggagatcctggaatcccaggaattcatggtgaa
aaaggaagtcctggtatccctggtctaccaggtcaacaaggtttccctggattgagagga
ttttctgggaatgatggcttgaagggttcaaaggggcttcagggcccagcagggctcgat
gtctatggtgtaagtggtgtcaaaggtactcctggacaaaaaggtgatcaaggggaacaa
agcactgtagctggattacccggtaacacaggcatgaaaggtgccaggggagagccaggt
ttaccaggcttaactggtttgcctggattaaatggagttcgtggacttccaggtgcttcg
aatgtgtctggtatcccaggagatattgggtcttcaggacttactggacagccaggctat
ccaggaccacaaggaagaccgggtatcccctctagaccaggtgtgaaaggagagccagga
ccacatggattacaaggagtaattggtgtgagaggagttcctggtgacagaggagtccaa
ggccttactggtattactggttatgctggagaaaaaggtcataaaggtcaacagggcatt
gatggggcttttggattacctggatttccaggagacagagggcctaaaggaccaaaaggt
gacagaggggagacaggtctgcagggtgaacccggatccccaggattacctgctctacct
ttgcgcgtggatgtggatcctggtcctattggtgtgatgggtgttattggtccacgaggc
attcaaggtgacatgggacctcagggtcttgtgggtgataaaggtacccagggcccacaa
ggtaagcaaggagtgcctgggatacctggaaggtctgctgcacctggttcaataggagac
cacggaccaatgggacaaagaggccctgaaggatataaaggaactcccggtgttccaggt
agtgctggtttgcaaggtatgccaggaagaagtgtgaacattggctatcttctagtaaaa
cacagccagactgatcaagagccaatgtgtcctattggcatggccaaattatggagtgga
tacagtctattgtactttgaaggacaggaaaaagcacacaatcaagacctaggtcttgct
ggatcttgtttgcaacgcttcagtacaatgcctttcctatactgcaacccaggtgatttg
tgttactatgccagccgtaatgataaatcctattggctgtcaaccactgctcctcttcca
atgatgcctgtagttgaagatgaaattgagccgtacataagtcgttgtacggtctgcgag
gctcctgccgttgcaattgctgttcacagccaggatagctccatcccattctgtccagta
ggctggcgaagcttatggattggatattcatttcttatgcatacagccgcaggtgatgag
ggaggaggacaatccctttcctctcctggtagctgcctggaggactttagagcaactcca
ttcattgagtgcaacggtgctcgtgggacttgccactactttgccaacaagtacagcttc
tggcttacaacaattgacaacgatttccagggttctccttcttcagatacactgaaagct
ggcctgattagaactcatatcagccgctgccaagtttgcatgaaaaacctgtaa

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