Pyxicephalus adspersus (African bullfrog): 140332297
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Entry
140332297 CDS
T11284
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04137
Mitophagy - animal
pads04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140332297 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
140332297 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140332297 (VCP)
03009 Ribosome biogenesis [BR:
pads03009
]
140332297 (VCP)
04131 Membrane trafficking [BR:
pads04131
]
140332297 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pads04147
]
140332297 (VCP)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140332297 (VCP)
Ribosome biogenesis [BR:
pads03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
140332297 (VCP)
Membrane trafficking [BR:
pads04131
]
SNARE
SNARE associated proteins
Others
140332297 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140332297 (VCP)
Exosome [BR:
pads04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140332297 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
AAA_lid_PRS2_C
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
140332297
NCBI-ProteinID:
XP_072269635
LinkDB
All DBs
Position
6:103670294..103693780
Genome browser
AA seq
805 aa
AA seq
DB search
MASGSDSKGDDLSTAILKQKSRPNRLIVDEAINEDNSVVSLSQGKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETQGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGGQGG
SGPSQGAGGGAGGNHFAEEEDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggatcagactccaaaggggatgatttatccacagctattttgaagcagaag
agccgacccaatcgtctaatcgtagatgaagcgatcaatgaagataacagcgtggtctct
ctgtcccagggtaagatggatgagctgcagcttttccgtggggacacagtcctccttaaa
gggaagaaaaggcgagaagctgtgtgcatagtcctgtctgatgatacttgctctgatgaa
aagatccgaatgaacagggtggtccgtaacaatctgcgtgtcaggcttggtgatgtcatc
agcattcagccatgcccagatgtgaagtacggcaaacggatccacgtcttgcccatcgat
gacaccgtggaaggaatcacaggaaacctctttgaggtctacttgaagccttacttcctt
gaggcctacaggccaatcagaaaaggtgacatctttctggtccgtggtggaatgcgtgca
gtggagtttaaggtggtggagacggatcctagtccatactgtatagttgccccagacaca
gtgatccactgtgaaggagagcccattaaacgtgaggatgaggaagagtctctcaatgaa
gtgggttatgatgacattggaggatgcaggaaacagctggctcaaatcaaggagatggta
gagctcccactaaggcaccctgcactctttaaggccattggcgtgaagcctcctcgtggt
atcctgctgtatggacccccaggaactggaaagaccctgattgctcgagctgtagctaat
gaaaccggcgccttcttcttccttatcaatggtcctgagattatgagtaagttggctggt
gagtctgagagcaacctgcgcaaagcctttgaggaagctgagaagaacgctcctgccatt
atctttattgatgaactggatgccattgcccccaagagagaaaagacacatggagaagtg
gaacgtcgtattgtgtctcagctgctaacgcttatggatggtctgaaacaaagagcgcat
gtcatcgtcatggctgcaaccaaccgacccaacagcattgacccagctctcagacgtttt
ggtcgcttcgacagagaggttgatattggaatacctgatgctactggcagactggaaatt
cttcagatacacaccaaaaacatgaagctggctgatgatgtggatctagaacaggttgca
aatgagactcaaggtcatgttggtgcagatcttgctgcactctgctctgaagccgctctc
caggccatccgtaagaagatggacctcatagacttagaagatgaaaccatagatgctgaa
gtgatgaattcattggctgtcactatggatgactttaggtgggcacttagtcagagcaac
ccatcagcactgcgcgagacagtggtcgaagtgccgcaggtcacctgggaggatattggt
ggtttagaagatgttaaaagggagctgcaggaattggtacagtatcctgtggagcatcct
gataaattcttgaagtttggcatgaccccatccaaaggtgtgcttttctatggaccacct
ggatgtggtaagactttgttagccaaggccatcgccaatgagtgccaggccaacttcatc
tccatcaaaggccccgagctgctaaccatgtggtttggagagtcagaagccaacgtcaga
gagatctttgacaaggctagacaggctgctccatgcgtcctgttctttgatgaattggac
tccatcgccaaggcccgtggtggcaacatcggtgatggtggtggagctgccgacagagtc
atcaaccagatcctgactgagatggatggaatgtccacgaaaaagaacgtcttcatcatt
ggcgccaccaacagacctgacatcattgacccagccatcctgcgtcctggccgtctggat
cagctcatctacattcctcttcctgatgagaagtcacgaattgctatcctaaaggccaac
ctgaggaagtctcctgttgccaaggatgtagacctggacttcttggctaagatgaccaat
gggttttctggtgctgacttgaccgagatctgtcagagagcctgcaagctggcaattcgt
gaatccatcgagaatgagatcaggagagaacgggagagacaaacaaacccttcagccatg
gaagtggaagaggacgaccctgtacccgaaatccgtcgggatcactttgaggaagctatg
cgctttgcccgccgctcagtcagtgacaacgacatcagaaaatatgaaatgtttgcacag
accttgcagcaaagccgcggctttggcagtttcagattcccctccggaggccagggagga
tccggtccaagtcagggagctggaggcggcgctgggggcaaccactttgccgaagaagaa
gacgatctgtatggctag
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