Pyxicephalus adspersus (African bullfrog): 140332379
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Entry
140332379 CDS
T11284
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140332379 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140332379 (SKIC3)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
140332379 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_16
TPR_8
TPR_11
TPR_19
TPR_12
TPR_17
TPR_CcmH_CycH
ANAPC3
TPR_15
TPR_10
HEAT_Nup120
BTAD
Fis1_TPR_C
HAT_Syf1_M
COG4_N
Motif
Other DBs
NCBI-GeneID:
140332379
NCBI-ProteinID:
XP_072269750
LinkDB
All DBs
Position
6:70531891..70588259
Genome browser
AA seq
1496 aa
AA seq
DB search
MDKNRIWEEEKKVASSCDGTQHNTMSSKEVKAALKNARDAIRSKDYKEALKQCKAALKLE
KTNYNAWVFIGLAAAELEQPDQAHAAYRKAVELEPEQLLAWQGLGNLYEKANQKEFKEDL
PNVYQKLLELYKTSDKQKWCDVCKKMVDLYEQDKQYLQAAQTWQQLINMKQDEGINKSEL
YKLWRKMTQLLAENMENQDNESQQQLVNAFENSISYLEEVPGEEHRALYQDFVLCLSKLP
HEEAKLKEICNKMTANYPTLTYPLEILSLYFIKSGDVGEEAVDCYNRLVQLDDANGPGLI
GIGVTALHSKKYDLAIEKLSKGVQTVSSCPHAWFFLAQAQQKLHRYEEVVLSCDQVINAF
SHDNLLPGVSEYKNLALQLKAEAMLEYFDPDEILKTLAQISNKDGDPVLIALKGKVYLKK
GFLEQSSKLSEELLQSYPEMAEGHFLEGMIYYTQKNYKDAEKSFQKAIERNLEVANYYYY
LGLTYWFMSEETRRDKTKAVTQFLKLLFGESKTLPQLSGASYWIVSADTLSKTGDKARAR
GCYKKAFDLDGKDGESGAAAVDLSMELGDMDTALAILSAVTEKANAGTAKWAWLRKGLYY
LRVGQHSKAVSDLHAALRADPKDSNCWECLGEAYLSRGGYTTALKSFMKANELNPDSMYN
AYKIASIKQILGTYKEAVAEYLQIVKKCGEYVPALKGLGECHLMLAKGALADFMDAKAVD
AIEKGIEYLSPKFTFHNILIAQGQLVLKIEKFFLVLFFLIKIKHLYSLGVNNNALAQHAF
IKSIQCQPNNAVAWTNLGALYLVNETIELSHQAFKVAQSLEPSYVRCWIGQALIAETVGS
YETMDLFRHTTELSMHTEGANGYAHWVCTTLQDKSKRNTELYRYSILQMNAITAAHLALN
KYTDRIQNDAAAFAMLGYLNEHLKLKIQAKEAYHRAVLILHDKEDKESFNCAFRNYGRSL
CAIGQYDEAIKTYTSTSTALTEFDDLIGLALVYFKKGLLQDSMKVYKTALSVAKTEQEKA
HILTAMAIIEYNQGNTDSAKTLLFKCSMLKESCIESLQALCALGLAKRDVTLATAALNEL
LKHARINDSVYERCLITSAIYALQGRTIAVQRQACKAVHSHPGNPELWTLLSRLVPQYTP
NNSKGGAVAGIVAHSLSLTQAKKSLLYTAVNELAAGTLTCDNKKQNALKSLQRAARFFPD
NPAVWSGLMAACQAECTASYFNKAPAKSTELNLTFLVSVKSKTEAMKQLPASYAQSLEAW
SLCQAISSLKDQDKLSEAENLCTKGIQSCPEQPPLFLLLRQIQYKQLVQSNAPLSEPVLE
ELKKTVMSKASFQSAWHWLAEIYQSQGMMLDAEMCYRKSLQLASQQGNFSGKLSSLLRLA
LLALRVCMAKIPDTRWPALLQEATSEVLKMTSCPLALLLQGLLQFCTKGSRKTRQLLEKV
VYQTGCSDTIASVARWYLLRHLHAKNDDQLIEVLLENAKAHEDSRVLDLHRQLSNS
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaatcgtatttgggaggaagaaaagaaggtggcatcatcctgtgatggaacg
caacataacactatgtccagtaaagaagtaaaagctgcactgaagaatgccagagatgca
attagaagtaaggattataaagaagcactcaagcaatgcaaggcggctctgaaattagag
aagactaactacaatgcctgggttttcattggattagccgctgccgagctagagcaacca
gaccaagcgcatgctgcctacaggaaggctgttgaacttgaaccagaacagttattggcc
tggcaggggctaggaaatttgtatgaaaaagccaaccaaaaagagtttaaagaagatttg
ccaaatgtgtaccaaaagcttttggaactttacaaaacctctgacaaacagaagtggtgc
gatgtttgtaaaaagatggtggatctgtatgagcaagataaacaatacttacaggctgca
caaacatggcaacagttaattaacatgaagcaagatgaaggaatcaacaagagcgagctc
tacaagttatggagaaaaatgacccagctgctggcagagaacatggaaaaccaagacaat
gaaagccagcaacagctcgtaaatgcatttgaaaattctatttcctacctggaagaggtt
ccaggcgaagagcatcgtgcactctatcaggactttgttctctgtttgtctaagctacca
cacgaagaagccaagctaaaagagatatgtaacaaaatgacagcaaactaccccaccctt
acctatcctttggaaatacttagcttgtacttcatcaagtctggggacgttggtgaagaa
gctgtcgactgttacaacaggcttgtgcaattggatgatgccaatggtcctggcctcatt
ggaataggagtcacagctttacacagcaaaaagtatgatctggcaatagaaaaattgtct
aaaggagtacagacagtgagttcatgtccccatgcatggttctttttggcccaagctcag
cagaaattgcacagatatgaagaggttgtgctgtcctgtgaccaagttattaatgctttc
tcacatgataacctattacccggagtctctgaatataagaatctcgctctgcagcttaaa
gctgaagcaatgctagaatattttgatcctgatgagatcctaaaaactcttgcacagatt
tctaataaggatggtgaccctgttctcattgctttaaaaggcaaggtttacttaaagaag
ggatttttagaacaatcatctaagttgtcagaagaactcctgcagtcataccctgagatg
gcagaaggacattttttggagggcatgatctattacacgcagaagaactacaaagatgct
gaaaaaagttttcagaaggccattgaaagaaatctagaggttgcaaactattattactat
cttgggctcacttactggtttatgagtgaagaaaccaggagagacaaaacaaaagctgtt
acacagtttttaaagctcctatttggggaaagtaaaactctcccacaattatctggagcc
tcatactggattgtttcagcagatactttgtcaaaaactggtgacaaagcccgggctcga
gggtgctataagaaggcatttgacctagatggcaaagatggagaatcaggggcagcagca
gtggacctaagtatggagcttggtgacatggacacagccttagctattttatctgccgta
acagaaaaggcaaatgcaggaactgcaaaatgggcttggcttcggaagggtctctactat
ctgagagttggtcaacattctaaagctgtgtctgacttgcacgctgcacttagagcggat
ccaaaggactccaactgctgggagtgtttgggagaagcctacctgagcagaggaggatat
accactgcactgaaatccttcatgaaagccaatgaactgaacccagactccatgtacaat
gcgtacaagatagcctccatcaagcagatcctagggacctataaagaggctgtagcagag
tacctgcaaattgttaagaagtgtggagaatatgtgccagcactaaaaggtcttggtgaa
tgccatttaatgcttgccaaaggtgcacttgcagatttcatggatgccaaggcagtggat
gctatagaaaaagggattgaatatctgagcccaaagtttactttccataacattctaata
gctcagggacagctagtactaaaaattgaaaagttttttcttgtacttttttttctaata
aaaatcaaacatttatattctttaggtgtcaacaataatgctcttgctcaacatgcattt
attaagtcgatccaatgtcaacccaataatgctgttgcatggactaatctgggtgctctg
tatttagtgaatgaaactattgagctaagccatcaggcttttaaggtggcccagtctctt
gaaccctcatatgtgagatgctggattggacaggccctgattgcagaaactgttggaagc
tatgaaactatggatctctttagacacactactgagctaagtatgcatacagagggtgcc
aatggatatgctcactgggtctgtacaacactgcaggataaaagcaagagaaatacagag
ctgtatcgctatagtatattgcagatgaatgccatcactgcagctcatctagccctgaac
aaatatacagaccgcattcaaaatgacgctgcagcatttgctatgctgggatatttaaat
gaacacctgaagctgaagatccaggctaaggaagcttaccatcgggctgttttgattctg
catgataaagaagacaaagaaagctttaactgtgcatttcgaaattatggacgttcactc
tgtgcaataggtcagtatgatgaagccatcaagacatacacatccacatccacagctctg
acagagtttgatgacctcatagggctggcccttgtatacttcaaaaaaggacttctacaa
gatagcatgaaagtgtacaagacggctttgtctgttgccaagactgagcaagagaaagca
cacatcctaaccgccatggcaataattgaatacaaccaaggcaacactgattctgccaaa
actttgctgtttaaatgctctatgctgaaggaatcctgcattgaaagtcttcaggctctc
tgtgctctaggattggcaaagcgggatgttaccttggcaacagccgcccttaatgagtta
cttaaacatgctagaattaatgatagtgtgtatgagagatgccttattacatctgctata
tatgcgttgcaagggaggactatcgccgtgcagagacaggcctgcaaagctgtgcacagc
catccaggcaatccagaactgtggacccttctatcaaggctggttccccagtatactccc
aataatagcaagggtggtgcagtcgcaggtattgttgctcatagtctaagcttgactcaa
gcaaagaaatctctgctgtacactgcagtgaatgaattagcagccggtactctaacatgt
gacaataaaaagcaaaatgctttaaaatctcttcaaagagccgcacgtttctttccagat
aatcctgcagtttggtctggattaatggccgcctgtcaagcggagtgtacggcttcctac
ttcaataaagcaccagccaaaagcactgaactcaatttgacatttttagtatctgtaaaa
tccaagactgaagcaatgaagcagcttcctgctagttatgctcagtccttggaggcctgg
tcattgtgtcaggctatttcttccctgaaagatcaagataaactttcagaggctgaaaat
ctgtgcactaagggaatacagagctgtccagagcagccaccgttattcttgctgttaaga
caaattcagtacaagcagcttgtacagtccaatgcacccttgtctgaacctgttttggaa
gaacttaagaagactgtgatgtccaaagccagtttccagtctgcttggcattggttagct
gaaatttaccagtcccaaggaatgatgttggatgctgaaatgtgctacaggaagagcctt
cagttggcatcacagcaaggaaatttcagtgggaaactctcaagcctgctgcgattagca
cttctcgccctgagagtttgtatggcaaagattcccgacactcgctggccagctcttctg
caagaggctacaagtgaagtcttgaaaatgacatcatgtccattggctcttctgctccag
ggacttctccagttctgcactaagggatcacggaaaacccggcaattattggagaaagtt
gtttatcagaccggatgcagtgatacgattgcttctgtcgctcgctggtatctccttaga
catttacatgccaaaaacgatgatcagctaattgaagtgcttttagagaacgccaaagct
catgaagacagccgagttctggatctccaccggcaactgtccaatagctaa
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