Pyxicephalus adspersus (African bullfrog): 140334190
Help
Entry
140334190 CDS
T11284
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pads04121
]
140334190 (RNF180)
Enzymes [BR:
pads01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140334190 (RNF180)
Ubiquitin system [BR:
pads04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140334190 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
140334190
NCBI-ProteinID:
XP_072272464
LinkDB
All DBs
Position
6:complement(82042036..82078588)
Genome browser
AA seq
543 aa
AA seq
DB search
MSHKGNVFPLRCWKCRKCVANSNCLIRDGECAHCEKGVDSSIYQGACNIWHVEAEESPDW
IKREIEKVHWTAGKLNCPYCRSRLGAFNFVGSTKCSCGHLAVVRLCKSKIDVGFSVTEPS
LSSTALPAFKLAKDSTTKSRCGLMEPYRRKWDLNADKYKPSSGLLMEALCLEVPASNNQM
WQTFLKTTKEPKSSSRECKRAFSGYFLHRKSKSLDLHAKELPKPNENFLMLQMSQRQTEV
SLLSSCSADQPSFSNRSLETVTGSSGNTSIVLNEPLLSRITHEHSNSTTLSASISNAEPS
RSMPRNVCQATAESTSTQITHLPPTRSAGVNKRLSKREINRLKNLRRKQRKREKWLLEHR
QINISNPRTEDEEEEDIPEKESYTCAVCLDVYFNPYMCYPCRHIFCEQCLRTLARDNPSR
TPCPLCRTIIAIVHFQTDLSKSSAALFPNEYLKRKQSFHRASCSKWPLPSCNRIFRVFGD
FRRHMDRIGRRQFPHAGYRFDFEDESHGWRFNLDMIIIYFYSMNWVIGFIVFCLLFYYFF
FSA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagccataaaggtaatgtcttcccgctgcgctgctggaaatgccgaaaatgtgtagca
aattccaattgtctgatcagggatggagaatgtgcacattgtgagaaaggtgttgattca
tccatttatcaaggggcttgtaatatatggcacgtggaggctgaagaaagtccagactgg
ataaaaagagagattgaaaaggttcactggacagctggcaagctcaactgcccttattgc
aggtcccgacttggggcctttaactttgtcggcagcacaaaatgctcctgtggccatctt
gccgttgtacgtctttgtaaaagcaaaattgatgtaggtttttcagtaacagaaccaagc
ctgtcatctactgctctgcctgcctttaaacttgcaaaggattccaccaccaaaagcaga
tgtgggctgatggagccatacagaaggaagtgggatctaaatgcagacaaatacaaaccc
tcttctggattattaatggaagcattatgtcttgaagtgccagcatccaacaatcaaatg
tggcaaacatttctaaaaaccacaaaggaacctaaatctagctccagagaatgcaaaaga
gcctttagtggatatttcttacaccgtaagtcaaaaagtttggacttgcatgccaaggag
ttgccaaaaccgaatgaaaacttcctgatgctgcagatgagccagagacaaactgaagtt
tctcttttaagttcttgcagcgcggatcagccttcttttagtaatagatcactagaaaca
gtaacaggttcttcaggaaatacatcaatagtattaaatgagccacttcttagtagaata
acacatgaacatagcaatagtactactttgtcagcatccatatctaatgctgaaccatca
agatcaatgcctcgaaatgtttgccaggcaacagcagaatctacctcaacccagatcaca
catcttccacctaccaggtcagctggggttaacaaacgattatccaagagagaaataaat
aggctgaaaaatttaaggagaaaacaaaggaaaagagaaaaatggctgcttgaacataga
cagatcaatatttcaaatccaagaacagaggacgaggaagaggaggatatccccgagaag
gaaagctacacttgtgctgtgtgcttagatgtatatttcaacccttacatgtgctatcca
tgccgccatatcttttgcgagcaatgtttacggacgctggcaagggacaatccatcaaga
acaccctgtcctctttgcaggacaatcattgccattgtgcactttcagacagacctcagc
aaatcttctgctgctctctttccaaatgaatatctgaaaaggaagcaaagtttccataga
gcaagttgttcaaagtggccattaccaagctgcaatcgaattttcagagtgttcggagat
ttcagaagacacatggaccgtataggaagaaggcagtttccacatgctggttacagattt
gactttgaagatgaaagtcatggatggagattcaacctcgacatgattattatatatttt
tactccatgaactgggtcattggatttattgtattctgtcttctcttttattacttcttt
ttctcagcgtga
DBGET
integrated database retrieval system
