Pyxicephalus adspersus (African bullfrog): 140334658
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Entry
140334658 CDS
T11284
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03013
Nucleocytoplasmic transport
pads03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140334658 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
140334658 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140334658 (THOC6)
03041 Spliceosome [BR:
pads03041
]
140334658 (THOC6)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140334658 (THOC6)
Spliceosome [BR:
pads03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140334658 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_1st
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
140334658
NCBI-ProteinID:
XP_072272999
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All DBs
Position
7:467304..469657
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AA seq
313 aa
AA seq
DB search
MLPAEMDVSRSLELLHMTVYSQCFSPCGKYLAVGNNLGQIGVFSLSSALGSEAKEQNKEP
SAMFQAHSGPIYCLSSTDRHLISAGDNEVKGWLWTDLCKKGCVAAWCRAAPSRNNLETPE
INSLVLNHVDNSLLLGGGSCHIHVMDLETGAFTVSFHGVSGGGVMGATLSMISSPGVQVH
PAAWYRGVILQISTQKFCLATDSDWMVCGGGPMLSLWHLRSVTPTTIFPIQESQQKVMFY
QDLILCAGHSPHINHCQINGEIRAQIPSTPSSIYSLCINETSQENKVLTAAGSSSRIDVF
TNFRYRAFSLTFT
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgttaccggcagagatggatgtcagtcgctctctggagctcctccatatgacggtgtac
agtcagtgcttctctccgtgtgggaagtatttggctgttggaaacaacctggggcagatc
ggggtgttcagcctctcctccgctctcggctccgaggccaaagaacagaacaaggagccc
tccgccatgtttcaggcacactcaggtcctatctactgtctgagctctacagatcgccat
ctgatcagcgccggtgacaatgaagtgaagggctggctgtggacagacctgtgtaagaag
ggctgtgtcgcggcgtggtgtcgcgctgcccccagcaggaacaatctagaaactcccgaa
attaacagcctggtcctgaaccatgtggacaattctcttctcctgggaggaggcagctgt
cacattcatgtcatggacctggagaccggagcattcaccgtgagttttcatggggtgtca
ggcgggggtgtgatgggggccactttgtctatgattagttctcctggggtgcaggtccat
cctgcggcctggtacagaggggttattcttcaaatttcaacccagaaattctgtctggcc
acagattccgattggatggtatgtggtgggggcccaatgctttccttgtggcatcttcgt
tctgtgacaccgaccaccatcttccctattcaggagagtcagcagaaagttatgttttat
caggatctgatcctgtgtgccgggcattcaccacacatcaaccactgtcagatcaatgga
gagatccgggcccagatacccagcaccccctcctccatttactccctgtgcatcaatgag
acctcccaggagaacaaggttctcacagcagctggcagcagctccaggattgacgtgttt
accaacttccgataccgcgcgttctctctcaccttcacgtga
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