Pyxicephalus adspersus (African bullfrog): 140335507
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Entry
140335507 CDS
T11284
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140335507 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pads03041
]
140335507 (PRPF40A)
Spliceosome [BR:
pads03041
]
Complex A
U1 snRNP components
U1 related factors
140335507 (PRPF40A)
Complex B
140335507 (PRPF40A)
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GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
140335507
NCBI-ProteinID:
XP_072274254
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Position
7:complement(39724638..39755391)
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AA seq
887 aa
AA seq
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MRGQFMNPVAHFPGVGMSGLPPRPSLAPPGMIPPLMGPLGAHQMGQMAPMIPPLMPGMMM
SAHVAPGTLPASMQPGINSLDPTLVQPSVTQAAHPVISAPPAISTNSAANEEPNKPKSVW
TEHKSPDGRTYYYNIETKQSTWEKPDELKSPAEQLLSKCPWKEFKSDSGKPYYYNSQTKE
SRWAKPKELEDLEALIKAEESSSTQEIPASAPAAAPIQISTTPVAAEATSTPTPTPIAVA
AEAELALSTPTTPALESEAMVNDSGEEQAHSVSSSIQEKDPEVSSSGIVEESVKQEVIAD
STPVEEEEEKTPKKTYTWNTKEEAKQAFKELLKEKRVPSTASWEQAMKMIINDPRYSALT
KLSEKKQAFNAYKVQTEKEEKEEARLKYKEAKEAYQRFLENHDKMTSTTRYKKAEQMFSE
LDVWNAISERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYCTTWSE
AQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNRE
SFQVFLDELHEHGHLHSMSSWMELYPTISSDIRFANMLGQPGSTALDLFKFYVEGLKARY
HDEKKIIKDILRDKSFVVELRTSFEDFVTVISSTKRATTLDAGNIKLAFNSLLEKAEARE
REREKEEARKMKRKESAFKSMLKQAAPPIEADSVWEEVRERFNKEPAFEDITLESDRKRI
FRDFVHALEHDCQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEEEEENHTKKKRQRSDSR
SATDRSSSAESEKSLKKAKKHKKKSKKRRHKSNSPESEGERERERERKDRDKDDKERSRQ
KEKQKSPKRKSTKEKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgagaggccagtttatgaaccctgttgcccatttcccaggggtgggaatgagtggttta
cccccaagaccaagtttggcaccaccaggcatgatccctcctttgatgggaccattgggt
gctcatcaaatgggacagatggctccaatgattcctccacttatgcctggaatgatgatg
tcagctcatgtggcacctggcacattaccagctagtatgcagccagggataaacagcttg
gatcccacacttgttcagccgtccgtgacgcaggcagcacaccctgtaatttcagcaccg
ccggccatttcaacaaactccgccgctaatgaagaacccaacaagccaaaatctgtgtgg
acagagcataaatcaccagatggtaggacatattattataatatcgaaaccaagcagtct
acgtgggagaaaccggatgaattgaaaagcccagctgagcaactcttatccaaatgcccc
tggaaggaatttaaatctgactctggaaaaccatactactacaattctcagacgaaggaa
tctcgttgggccaaacctaaggagttagaagatctagaagcgttaattaaagctgaagaa
agcagtagcactcaagaaattccagcttcagctccagctgctgcgcctatacaaattagc
actactccagttgcagcagaggcaactagtacacccacacctacccctatagcagtagct
gctgaagcagagcttgcattgtccacacccacaacacctgccctagaatctgaggcaatg
gtcaatgactctggtgaagaacaagcccattccgtgtcatcctctattcaagaaaaggac
ccagaagtcagcagcagtgggattgtagaggaatctgtcaaacaagaggttatagcagac
tcaactccagttgaagaggaagaagaaaaaactcctaaaaagacatatacatggaacaca
aaggaagaagctaagcaagcattcaaggagctcctcaaggaaaagcgtgtaccatctact
gcttcttgggaacaagccatgaaaatgatcattaatgacccaagatacagtgcattgaca
aagctaagtgagaagaaacaggcattcaatgcttacaaggtacagacagagaaagaagaa
aaggaagaagccaggctaaaatacaaagaggctaaagaagcctaccaaagatttcttgaa
aatcatgacaaaatgacctcaaccacccgatacaaaaaagcagagcagatgttctctgag
ctagatgtctggaatgcaatttccgagcgtgaccgtcttgagatttatgaagatgttttg
ttttatcttgcaaagaaggaaaaggaacaagccaagcagctcagaaagaggaactgggaa
gctttaaagaatatattggacaatatggccaatgtaacctattgtacaacctggtcagaa
gcgcagcaatacctcatggataaccctacttttgccgaagatgaggagctacagaatatg
gataaagaagatgctttaatatgttttgaagaacatattcgggctttggaaaaggaagaa
gaggaagagaagcaaaaaacgttgctaagggaaagacgtcgacagcgaaaaaatcgggaa
tctttccaggtgtttttagatgaattacatgaacatggtcacttacattccatgtcatct
tggatggagctgtatcccacaatcagttctgacatccgatttgccaacatgcttggtcag
ccaggttccacagcattagacctctttaaattctatgtggagggtctaaaggctcgatat
catgatgagaaaaagatcatcaaggatattttaagggataaaagttttgtggttgagctt
cggacaagttttgaagattttgttacggttatcagctctacaaaaagagccactacatta
gatgctggaaatatcaaacttgctttcaacagccttctagagaaagcagaagctcgggag
agggagcgagagaaagaagaggcccggaaaatgaaaaggaaggaatctgcttttaagagt
atgttaaaacaagcagcaccaccaatcgaagcggactctgtgtgggaagaggttcgagag
aggtttaataaggagccggcatttgaagatatcacactggaatccgaccgtaaacgaata
tttagggattttgttcatgccctagagcatgattgtcagcatcatcattcgaaaaacaag
aaacactcgaagaaatcaaagaaacaccatcggaagaggtctcgctctcgctctggctct
gaatctgaggaggaagaggagaaccacacaaaaaagaaaagacaaagatcagactcccgt
tcagccacggatcgttcctctagtgcagaatcagaaaaaagtttaaaaaaggcaaagaag
cacaaaaagaagagtaagaagaggagacataaatctaattctccagaatctgaaggagaa
agggagagggagagggagagaaaagacagagacaaggatgacaaagaacgatcgaggcaa
aaagaaaaacagaaatctcctaaaagaaaatccacaaaggagaaggattctggtaactgg
gacacatccggaagcgaattaagtgaaggggagctggaaaagagaagacggaccctcctg
gagcagctggatgatgatcaataa
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