Pyxicephalus adspersus (African bullfrog): 140335529
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Entry
140335529 CDS
T11284
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03082
ATP-dependent chromatin remodeling
pads03083
Polycomb repressive complex
pads04110
Cell cycle
pads04330
Notch signaling pathway
pads04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140335529 (HDAC1)
03083 Polycomb repressive complex
140335529 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
140335529 (HDAC1)
04350 TGF-beta signaling pathway
140335529 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
140335529 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pads03036
]
140335529 (HDAC1)
Enzymes [BR:
pads01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
140335529 (HDAC1)
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
140335529 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
140335529 (HDAC1)
BRAF-HDAC complex
140335529 (HDAC1)
REST complex
140335529 (HDAC1)
SHIP complex
140335529 (HDAC1)
MiDAC complex
140335529 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
140335529 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
140335529 (HDAC1)
Chromatin remodeling factors
NuRD complex
140335529 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
140335529
NCBI-ProteinID:
XP_072274308
LinkDB
All DBs
Position
1:complement(89424847..89448136)
Genome browser
AA seq
480 aa
AA seq
DB search
MAYSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
SVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMTKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFMKTFNLPLLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAVQDDSGDEDDDDPDKRISIRSSDKRIACDEEF
SDSEDEGEGGRRNVANFKKAKRAKTDDEKDGEDKKDVKEDDKLKEEKPEAKRVKEETKTA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcaaggaacaaagaagaaagtgtgctattactatgacggcgatgttggc
aattattattatggacaggggcatccaatgaaacctcacaggatccgtatgacacacaat
ctgcttcttaattatggattgtacagaaagatggaaatttatagaccacacaaagccagt
gccgaagaaatgacaaaatatcacagtgatgactatatcaaatttctgcgttccatccgg
ccagacaacatgtcagaatacagcaagcagatgcaaagatttaacgtcggtgaagactgt
ccagtgtttgatggtctttttgagttttgccagttgtcaacaggaggatctgttgcaagt
tctgttaaactaaacaaacagcagacagacattgctgtaaattgggcaggtggacttcat
catgccaagaagtctgaagcttctggattttgctacgtcaatgacatagtgcttgctatt
ctggagttgcttaaatatcatcagagagtactgtacattgatattgatattcatcatggt
gatggtgtggaagaggctttttataccacagacagagtcatgacagtttcttttcataaa
tatggagaatattttccaggaactggtgaccttagggatattggggctggaaaaggtaaa
tactatgcagtgaactacccattgcgagatggtattgatgatgaatcctatgaagccatt
tttaaaccagtaatgaccaaggttatggaaatgtaccagcctagcgcagttgttcttcag
tgtggtgcagattcactttctggagacagacttgggtgttttaatctaacaatcaaagga
catgctaagtgtgtagagtttatgaagacttttaacctgccactgctgatgctgggtggt
ggtggctacacaattagaaatgttgcccgctgctggacatatgagacagctgtggctctg
gacactgagatacccaatgagcttccatacaatgactactttgaatactttggccctgac
ttcaaactccacatcagcccatctaatatgacaaaccagaacacaaacgagtacctggaa
aagatcaagcagcgactgtttgagaatctacgtatgcttccacatgcgcctggtgtacag
atgcaggcgattcctgaggatgctgtgcaggatgatagcggtgatgaagatgatgatgat
ccagacaaacgcatttccattcgatcctcagataagagaattgcatgtgatgaggagttc
tctgattccgaggatgagggtgagggaggacgtaggaatgttgccaatttcaaaaaggca
aagcgtgccaaaacagatgatgaaaaagatggcgaagataaaaaagatgttaaagaggac
gacaagctaaaagaagaaaagccagaagctaaacgggtaaaagaggagaccaaaactgcc
tga
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