Pyxicephalus adspersus (African bullfrog): 140335701
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Entry
140335701 CDS
T11284
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140335701 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140335701 (BARD1)
04121 Ubiquitin system [BR:
pads04121
]
140335701 (BARD1)
03036 Chromosome and associated proteins [BR:
pads03036
]
140335701 (BARD1)
03400 DNA repair and recombination proteins [BR:
pads03400
]
140335701 (BARD1)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
140335701 (BARD1)
Ubiquitin system [BR:
pads04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
140335701 (BARD1)
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
140335701 (BARD1)
DNA repair and recombination proteins [BR:
pads03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
140335701 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
RTT107_BRCT_5
PTCB-BRCT
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
140335701
NCBI-ProteinID:
XP_072274646
LinkDB
All DBs
Position
7:55543018..55584085
Genome browser
AA seq
682 aa
AA seq
DB search
MDLCQDASLKQSTTEGGECNKKQIKMRFSPRRGKMRYTLERGDNQQIPLKTEQIPVLETY
EFVSSSPTVQSVKKQNSSKPKKNKKKKLEAINQEWGVGAQMQNSDGVNKFDVSKSGRLVS
FCTSVTTSPSEKNCGSPMRNSHSKNENCIEEHAEMEFKNNNRLAKVGLMEPQGSLPVSST
NILKTEQDCAYKNDLADKSNPHRYRSDINGGEDEAKNKKSLQNSRQKNVLNVTPKREKKE
LKRKEHPSVSPVSSTSKRSRKGYLKPQTSPRSEEMCWDKKEIGNSKLEQPEMPSKPSTPS
SKNKDRKISQTNASIQMSPSNLLVSKKNIKGETLLHVAAIKGDLMGVEELLKNGANPNVK
DNAGWTPLHEACNHGHSDVVRLLIQYQALVNTAGYQNDTPLHDASRNGHVTIVRLLLSHG
SSPDAVNIFGLRPVDYAETEEIKLALLQAQKNKEPLVKLPCSVQNRSQRREEAVVLLASG
LSTAEKSNLAKLAALLKAEICSNYNSSVTHLIVGEDPMPRTMKCMMGISSGCWILQYAWV
KACLESCGREPEEEHEVKGGPHRARLNREQLLPKLLDGCHFYFLGSFKEHKKEDLTELVK
AAGGQILIRQPKPDSDVTQTINTVAYHADADSDQRFCTQYIIYDKNSKYVPGKVRQGKVW
FAPSNWLIDCITCFQLLPVQQK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatttatgtcaagatgcatcgctcaaacagagcactactgaaggaggagagtgcaat
aaaaaacagataaagatgcggtttagtcctcgtagaggaaagatgaggtataccttggaa
agaggagacaatcaacagattccattaaaaactgaacagattccagtgttggaaacctat
gagtttgtgtcctcttcaccgactgtgcagtcagtgaaaaagcaaaatagttcaaaacca
aaaaaaaacaaaaagaagaagctagaagctatcaaccaagaatggggagttggggcacaa
atgcagaacagtgatggtgtcaataagtttgatgtttcgaagtctggtagattggtctca
ttttgcacttctgtaacaacatctcccagtgaaaaaaactgtggttcaccaatgagaaat
agccattctaagaatgagaactgtatagaagaacatgcagaaatggaatttaagaataat
aatagattggcaaaggtcggtctaatggagcctcaaggttctttgccagtttctagcact
aacatacttaagactgagcaagactgtgcttataaaaatgacctagcagataaaagtaat
ccacacaggtataggagcgacatcaatggtggtgaagatgaagccaaaaacaaaaaatct
ttacaaaattctagacaaaaaaatgttttaaatgtaactcctaaaagagaaaagaaggaa
ttgaaacgtaaggaacatccatctgtttctccagtctctagtacatcaaaacgttcaagg
aaagggtacctaaagccacaaactagccctaggtctgaggaaatgtgttgggacaaaaaa
gaaataggcaattctaagttggaacaaccagaaatgccttccaagccttcgacaccttct
tctaaaaacaaagacagaaaaataagccaaaccaacgcaagcatccagatgtctccaagt
aacctattggtttctaagaagaacattaagggtgaaacgctgcttcatgtagctgccatt
aagggtgacctgatgggagtggaggagcttctgaagaatggcgctaaccccaatgttaag
gacaatgctggctggacacctttgcatgaagcctgtaatcacggacactcggatgtggta
agactattgattcagtaccaagcgctagtgaataccgctggttaccagaacgacactcct
ttacatgatgcttcaagaaatggccatgtaaccatcgtcagactactgctcagccacgga
tcgtccccagatgcagttaatatattcggtctgcggcctgtagactatgcagaaacagag
gagataaagttggctttgctgcaagcacagaaaaacaaggagccacttgtgaagctgcca
tgctctgtccaaaacagaagccaacgtagagaagaagctgttgtgcttttggcaagtggc
ctgtcaacagctgaaaagtcaaatcttgccaagcttgctgcacttctaaaagcagagata
tgctccaactacaacagttcagtaactcacctcattgttggagaggatcccatgccccgt
actatgaagtgtatgatggggatatcatctggctgctggatccttcaatatgcttgggtg
aaggcatgtctagagtcatgtggccgagagccagaagaagagcatgaagtgaagggagga
cctcacagagctcgcctgaaccgagaacagctgctaccgaaactactggatggatgtcat
ttttatttcctgggatctttcaaagaacacaaaaaggaagatttgactgagttggttaaa
gctgctggaggacaaattcttattcgccaaccaaagcctgatagtgatgttacccagact
attaacactgtggcttaccatgctgatgctgactctgatcaaagattctgcacacagtat
atcatttatgataagaattccaaatatgttccaggcaaagtacgccaaggcaaggtctgg
tttgcaccctcaaactggcttattgactgcatcacctgctttcagctgctgcctgtgcaa
caaaagtaa
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integrated database retrieval system
