Pyxicephalus adspersus (African bullfrog): 140335846
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Entry
140335846 CDS
T11284
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140335846 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pads03041
]
140335846 (SF3B1)
03036 Chromosome and associated proteins [BR:
pads03036
]
140335846 (SF3B1)
Spliceosome [BR:
pads03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140335846 (SF3B1)
Complex B
140335846 (SF3B1)
Complex C
U2 SnRNP specific factors
140335846 (SF3B1)
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
140335846 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
140335846
NCBI-ProteinID:
XP_072274929
LinkDB
All DBs
Position
7:66336062..66357947
Genome browser
AA seq
1305 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDETQGVGLDSTGYFDRDIYGGSDSRFSGYLTSIAA
NEQEDDDDEDNSAAAFEKKPGYHAPVALLNDIPQSSEQYDPFAEHRPQKIADREDEYKKQ
RRAMIISPERLDPFADGGKTPDPKTNARTYTDVMKEKQLRKEQHEIYQQMAEKAKSGDLK
VVNGSSASAASQPSSKRKRRWDQTADQTPGSTPKKLSSWDQAETPGHTPSLRWDETPGRS
KGNETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKT
ERDTPGHGSGWAETPRTDRGGESIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTP
IGTPAMNMATPTPGHIMSMTPEQLQVWRWEREIDERNRPLSDDELDAMFPEGYKVLPPPA
GYVPIRTPARKLTATPTPLGGLTGFHMPAEDKTMKSVNDQPSGNLPFLKPDDIQYFDKLL
VDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLL
MSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISN
LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ
ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY
GIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQS
PDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVE
LANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYA
FQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTA
VVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPR
LTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVN
TFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVP
ELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGV
YGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPAR
KVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYVL
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgcaaaaacacacgaagatattgaagcacaaatccgtgaaattcaagga
aagaaggcggcactcgatgaaacacaaggagttggactcgattcaacaggttactttgac
cgggatatatacggtggaagtgacagtagattttcaggatatttgacatctatcgcagca
aatgagcaggaagatgatgatgatgaagataattcagcagcagcatttgagaaaaaacca
ggatatcatgcacctgttgcattgcttaatgatatcccccagtcatctgaacaatatgat
ccgtttgcagaacatagacctcagaaaattgcagatcgggaggatgagtataaaaagcag
agaagagcaatgatcatttccccagagcgtcttgacccttttgcagatggtggcaagaca
ccagatcctaaaacaaatgcacgaacatacacagatgttatgaaagagaagcagttaaga
aaggaacagcatgaaatctatcagcagatggcagaaaaggcaaaatctggggatttaaaa
gttgtcaatggatcctctgcttcagcggcatcacaaccatcttcaaagcgtaaaagaaga
tgggatcaaactgctgatcaaactccaggatctacacccaagaagctctcaagctgggat
caagcggagactcctggacacacaccttcattaagatgggatgagacccctggtcgatca
aagggaaatgaaacccctggagctactccaggctcaaaaatctgggaccctactcccagc
catactcctgctggagcagcaaccccaggacgtggtgataccccaggccatgccactcca
ggtcacggaggtgcaacttcaagtgcgcgtaaaaacagatgggatgaaacgcctaaaaca
gagcgtgatactcctggtcatggaagtggttgggctgagactccacgtacagatcgtggt
ggagaatcaattggtgaaaccccaactcctggagcaagtaaaagaaaatctcgttgggat
gaaactccagctagtcagatgggtggaagtactccagtactgacaccaggaaaaacacca
attggtacccctgctatgaatatggctactcctacaccaggacatattatgagcatgact
cctgaacaactccaggtatggcgttgggagagagaaattgatgaaagaaaccgaccactt
tcagatgatgagttggatgccatgtttccggaaggatataaggttcttcccccaccagct
ggatatgtcccaatacgtaccccagcacgtaaactgactgcaactccaacaccattgggt
ggcttaactggttttcacatgcctgcagaagacaagactatgaaaagtgtcaatgatcaa
ccatcaggaaatcttccattccttaaaccagatgatattcagtactttgataaactgctg
gttgatgttgatgaatccacacttagtccagaagagcagaaggaaagaaaaataatgaaa
ctactgctgaaaataaagaatggcacacctcccatgagaaaggcagcactgaggcagatt
acagataaagctcgtgagtttggagctggacctttgttcaatcaaatattaccgttgctg
atgtctccaacacttgaagaccaggaacgacatttacttgttaaagttattgatagaatc
ctatacaaacttgatgatttagtccgtccatatgtacacaagatccttgtggttattgaa
cccttgctgattgatgaagactattatgccagagtggaaggcagagaaattatatccaac
ttggctaaggctgctggtttagccacaatgatttccacaatgagaccagatattgacaat
atggatgaatatgtccgtaacacaacagccagagcctttgctgttgttgcctctgcgctt
ggcattccttccttgcttccatttttgaaagctgtttgtaagagcaaaaagtcatggcaa
gcccgccacactggtatcaagattgtgcagcagattgctatactgatgggatgtgccatc
ctaccgcatttaagaagcttggttgaaattattgaacatggacttgttgatgaacagcag
aaagttcgtactataagtgctctggctatagctgctttagctgaagcagccactccatat
ggtattgagtcttttgattctgtgctaaaacctttgtggaaaggtattcgtcaacacaga
ggaaagggtctggctgcgttcctaaaagccattggctaccttatacccctcatggatgct
gaatatgcaaactactataccagagaagtgatgttgattttaatccgagagtttcaatct
cctgatgaagagatgaaaaagattgttttgaaggtggtgaagcagtgttgtggcactgat
ggtgtggaagcaaattacataaaaacagaaatccttcctccatttttcaaacacttctgg
cagcacagaatggcattggacagaagaaactatagacagttggtggacactacagttgag
cttgcaaataaagtgggagctgcagaaataatatctagaattgtggatgacttaaaagat
gaagctgagcaatacagaaaaatggtcatggaaaccatcgagaaaattatgggcaatctt
ggagctgctgatattgaccacaagcttgaagaacagctgattgatggcatcctttatgct
tttcaggagcagaccacagaggattcggtgatgttgaatggttttggtacagttgtcaat
gcacttggaaaaagagtcaaaccataccttccccagatttgtggtactgtgctgtggcgt
ttaaacaacaaatctgctaaagtgagacagcaagccgctgatttaatatctcgcactgca
gttgtcatgaaaacatgtcaagaggaaaaattaatgggacatttgggcgttgtgttgtat
gaatatcttggagaggaatatcctgaagtgctgggaagcattttaggagcattgaaggcg
atagtcaatgttattggtatgcataaaatgactcctccaatcaaagatttgctgccaaga
cttacacccattttaaaaaataggcatgagaaagtacaggagaactgtattgacctggtt
ggacgtatagccgacaggggagcggaatatgtttcagcaagagagtggatgagaatttgt
ttcgaacttttggaattactgaaggcacataaaaaggcaattagaagagctactgtgaac
acatttggctatatagccaaagctattggacctcacgatgtgcttgctacactgcttaat
aacttaaaagtacaagaaagacaaaacagagtgtgtaccactgtggcaatcgctattgtt
gcagaaacatgttcaccttttacagtcctgccagcgcttatgaatgaatatagagtccca
gaacttaatgtccagaatggtgtgttaaagtccttgtctttcctcttcgagtatattgga
gaaatgggaaaggattatatctatgctgttacacctttgcttgaagatgctttgatggac
agagatcttgttcacagacagacagctagtgccgttgttcagcacatgtccctcggagtt
tatggttttggttgtgaagattctttaaatcacctgttaaattatgtatggcccaatgta
tttgaaacatctcctcatgtcatccaagctgtaatgggagcacttgaaggccttagggtt
gctattggtccatgccgaatgctgcagtattgcctacagggccttttccatcctgcccga
aaagtcagagatgtttactggaaaatatacaactctatatatattggttcacaagatgct
ttgattgcccattatcctcgtatctacaacgatgacaagaatacgtacattcgttacgag
cttgactacgtcttataa
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