Pyxicephalus adspersus (African bullfrog): 140335936
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Entry
140335936 CDS
T11284
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03430
Mismatch repair
pads03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140335936 (PMS2)
03460 Fanconi anemia pathway
140335936 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pads03400
]
140335936 (PMS2)
DNA repair and recombination proteins [BR:
pads03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
140335936 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
140335936
NCBI-ProteinID:
XP_072275053
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Position
7:complement(73003500..73023786)
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AA seq
477 aa
AA seq
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MEQPCNELAKAIKPIDRKSVHQICSGQVVLTLGTAVKELLENSIDAGATCIDIKLKDYGG
ELIEVSDNGCGVEEHNFEGLTLKHHTSKLQDFSDLVNVETFGFRGEALSSLCALSDLSIF
TCHKDAKVGTRLVFDQNGKIVQKSPLPRQQGTTVTVQQLFYTLPVRHKEFQRNIKKEFAK
MVQVLQAYCIISTGVRINCTNQVGQGKRMPVVCSSGTSSSMKENIGAVFGQKQLQSLIPF
NQLPPNESVCEEYGLNHAEVHDGFYNISGYISHCDHGVGRSATDRQFFFINQRPCDPAKV
SKVVNEVYHMFNRHQYPFVVLNICVNSECVDINVTPDKRQILLQEEKLLLAILKTSLLAM
YSGNVNKINLNNPLVDATGNFRKLSTEASNGHIKEQNVSERGALVVSKLREAYSLNQKSS
FGSPQKNPWRNSSNLNDLEQLAKKERFTIPVERYKRFTDCYRKCLTLVITSIGCATK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccttgtaatgaactcgctaaagcaatcaagccaatagaccgtaagtctgtc
catcagatttgctctggacaggtggtgctgactttaggaactgcagtaaaagagctcctg
gagaacagcatagatgccggtgcaacatgtatagatataaaactgaaggattatggagga
gaactcattgaagtctcagataatggctgtggagttgaggaacataattttgaaggcctg
acattgaaacatcacacatccaagctgcaagatttctctgatttggttaatgtggaaaca
tttggctttcgaggagaagctctaagctccctgtgtgcattaagtgatttgtccattttc
acctgccataaagatgcaaaagttggaacccgtttggtttttgaccagaatggaaaaatt
gtgcagaaatctcctctccctcgccagcagggaactacagtcactgtgcaacagcttttc
tacacccttccagtgcgtcacaaggagtttcagcggaacatcaaaaaggaatttgcgaaa
atggtacaagttttacaagcatactgtattatttcaactggtgttcgtattaactgcacc
aaccaggtaggccaagggaagagaatgcctgtggtgtgttctagcggcacttccagcagc
atgaaagaaaacattggagctgtgtttggacaaaaacagctgcagagtttgattcctttt
aatcaactaccaccaaatgaaagtgtttgtgaagagtatggattaaatcatgcagaggta
catgacgggttctacaatatttcaggatacatatctcattgtgatcacggtgtgggaaga
agtgcaacagacagacagtttttcttcatcaaccagcgaccatgtgatccagcgaaggtc
tctaaggttgtgaacgaggtgtatcacatgttcaacagacatcagtatccatttgttgtt
ctcaacatatgcgttaattcagaatgtgttgatatcaatgtcactccagacaaaaggcaa
attctactccaagaagagaaacttttgttggccattttaaagacttctcttcttgctatg
tacagtggcaatgtgaataaaataaatctgaataatccactggtggatgctacagggaat
ttcagaaaattaagtacagaagcatctaatggacatataaaagaacaaaatgtgtcagag
agaggtgcgcttgttgtttctaagcttagagaagcctattccctcaaccagaaatcatca
tttggatcaccacaaaaaaatccttggaggaactcttcaaatctgaatgacctggagcag
ctggcaaagaaagagcggttcacaattccagtagagagatataaaagattcactgattgt
tacagaaagtgtttaacgttagttattacttccatagggtgtgctaccaagtaa
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