Pyxicephalus adspersus (African bullfrog): 140336515
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Entry
140336515 CDS
T11284
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140336515 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140336515 (NDC1)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140336515 (NDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
140336515
NCBI-ProteinID:
XP_072275773
LinkDB
All DBs
Position
8:complement(19459550..19474960)
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AA seq
664 aa
AA seq
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MSGIAESQVLKWRVASSFAWSVILLPLSCVAFITLSRFNILHPIQWLTDVLGDTASSSTV
FCLLLLSVLQGVQCAFNVKFYSVVPTIPGSRLSLIGQILLPQRVLHSFVHSLMGMLVFWC
CTVLCRGPYQSLAVPCNSDSSDKDEEQKMCLNERYLFLLLSGAFLGYSYSMLYFVHNMNY
LSFPFVQQYKYLQFRRFLPLLLHHSGLQSLYLVRNSAAIYFFLGYIPRAWVQGILNLHLD
QQLPPLDSLLGLLDLSLFYQIWLCGTFLLVTWHIVWLLFQIHTTEDRMFPVQTSFVEDAE
TCLPNALGCNSPLLKYLAFQDLVLLSQYSKIRRQEVFSLSQPGGHPHSWTAISKECLNVL
SNLTARLVAHQEAAASNGRVRFPSSSAEFRKSSGSSGTSLSESIDHAGKIAPVPQTPVSA
LMKNAASLKKPWDSGSVFASPAIGHISANKDQNSPWHGAVQSPHVVRRGAKLWTCGTDVD
IQRSGSETSPVSQVSQRPISSSEGPSFFFLWYQNKQEQIKNFLSKRVLIMYLFSKHPEAS
SQEVFADSQIHIWALEGLSHLVAASFSEDRMGVVQTTLSNILATLLNLQEAVEKHFKLPH
ASSKPARAASGLVDSSYKTLRFALRSTLKTAIYRITTTFGEHLHAIPASTEHRKKLQQFL
DFKE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggattgcagagagccaggtattgaaatggagagtggcaagcagttttgcctgg
tcagtcatattgctacctctgagctgtgtagcctttatcactctcagcaggttcaatatc
cttcaccccatacaatggcttacagatgtactaggtgatactgccagcagttccacagtc
ttttgtctgcttctgctgtctgtgctgcagggagtacaatgtgccttcaatgtgaagttc
tactcagtggttcctaccatccctggctcccgcctctcactgattggccagatcctgctg
ccacaacgtgtgcttcactcgtttgttcattctcttatgggaatgttggtgttttggtgc
tgcactgtcctctgccgaggtccataccaaagtcttgctgttccttgcaattcagattcc
agtgataaagatgaggaacagaagatgtgtctgaatgaacgttacctcttcctgctactt
tctggggctttcctgggttacagctacagcatgctgtatttcgtacacaacatgaactac
ctgtccttccccttcgtgcagcaatataaatatcttcagttccggaggtttctgccttta
cttctgcatcacagcggtctccagtccctgtatctggttcggaactctgctgccatctat
tttttccttgggtatattccacgagcatgggttcaaggcattttgaacttacatttggat
caacaattaccgccacttgattctctgcttggacttctggatctctcattattttaccag
atctggttatgtggtactttcctgctagtcacctggcatatagtctggttattgttccag
atccacacaacagaggaccgaatgtttcctgtacagacatcctttgttgaagatgcagaa
acttgcctacccaatgctttaggctgcaactctccactcttgaagtatcttgccttccaa
gatcttgtgctgctttctcagtattccaaaattcggagacaggaagtgttcagtcttagc
cagccaggaggccatccacacagttggactgccatttctaaagaatgcctaaatgtttta
agtaatcttactgccagactcgtggctcaccaagaagctgctgctagtaatgggcgtgta
aggttcccatcttcctcagcagagtttaggaagtcatccggcagctcaggcacatcactc
agtgaatctattgatcatgctgggaaaattgctcctgtccctcaaacacctgtctctgca
cttatgaagaatgctgcttctctgaaaaaaccctgggactctggcagtgtttttgcctct
ccagcaataggtcatatctctgccaacaaagaccagaattccccatggcatggagcagtg
cagagcccccatgttgttaggagaggtgcaaagctttggacatgtggtacagatgtggat
atccagagaagtggctcggaaacatcccctgtctcccaggtgagccaaaggcccatcagt
agcagcgaaggacccagcttcttcttcctatggtaccagaacaaacaggagcagattaaa
aactttttgtcaaagcgagtcttgatcatgtacctgttcagtaagcatccagaggcctcc
agtcaggaagtgtttgcagactcacagatccatatctgggctttggaaggtttgtctcat
ctggtggcagcctcattctctgaagaccggatgggggtggtgcagacaacactgtccaac
atactagccacacttctgaatctacaggaggcagtagagaagcattttaagctcccacat
gcatccagcaagcctgccagagctgcgtcaggtttggtggattcctcctataagacacta
cggtttgccctgcgatctactctgaagactgctatctataggataaccacaacattcgga
gagcacttacacgccattccagcatccacagaacaccggaaaaagctgcagcagtttctt
gacttcaaagaatga
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