KEGG   Pyxicephalus adspersus (African bullfrog): 140336935
Entry
140336935         CDS       T11284                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
pads  Pyxicephalus adspersus (African bullfrog)
Pathway
pads03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pads00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    140336935 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pads03019]
    140336935 (WDR82)
   03036 Chromosome and associated proteins [BR:pads03036]
    140336935 (WDR82)
Messenger RNA biogenesis [BR:pads03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     140336935 (WDR82)
Chromosome and associated proteins [BR:pads03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     140336935 (WDR82)
    COMPASS/SET1 complex (yeast)
     140336935 (WDR82)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_1st DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_RFWD3 NBCH_WD40 Beta-prop_IFT140_1st PAC11 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_WDR35_TULP_N PEP5_VPS11_N Tricorn_2nd MinC_C Beta-prop_Nup120_160 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 140336935
NCBI-ProteinID: XP_072276495
LinkDB
Position
8:45630919..45639921
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSPSGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
AFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMTYDRTCEWTSLKFSNDGKLILICTNGGFLRLIDAFKGAVLHSFGGYNNAKA
VTLEASFTPDSQFIMIGSEDGKIHVWNAESGMKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctcacagacaacgtgctgcgcagtttccgcgtggcaaaggttttccgggaaaat
tcagacaaaatcaactgctttgacttcagccccagtggggagacggtgatttccagcagc
gacgacgactccatcgtattgtacgactgtcaggaggggaagcccaagcgtacactgtac
agtaagaagtatggagtggacctcatcagatacacacacgcagcaaacaccgtggtgtac
agctccaataaaattgatgatacaatccggtatctttctctacatgataataaatatatc
cgttatttcccgggccacagtaaaagggttgtggccttgtctatgtcccccgttgacgat
gcctttatctctggctcccttgacaagacgatccgattatgggaccttcgttctcctaac
tgccagggacttatgcacctacaggggaaacccgtgtgttccttcgaccccgaaggtctg
atctttgcagccggagtgaattcagagatggtgaagttgtacgatctccggtcatttgat
aagggtccttttgccacctttaaaatgacttacgaccgcacctgtgagtggacatccctc
aaattcagcaacgatgggaaattaatcctcatctgtacgaatggcggatttctgcggctg
attgatgcatttaaaggggctgtacttcactccttcgggggatataacaatgccaaagcg
gtcacactggaggcctcgttcacccccgattcacagtttattatgatcggttcagaagat
gggaagatccacgtgtggaatgcagaaagtggcatgaaagtggctgtgctggatggtaaa
cacaccgggccaatcacttgtctgcagttcaacccaaagttcatgacctttgccagcgct
tgttccaacatggccttctggctgccaaccatcgatgactga

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