Pyxicephalus adspersus (African bullfrog): 140337148
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Entry
140337148 CDS
T11284
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pads04121
]
140337148 (PDZRN3)
Enzymes [BR:
pads01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140337148 (PDZRN3)
Ubiquitin system [BR:
pads04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
140337148 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Sina_ZnF
Prok-RING_4
zf-TRAF
zf-rbx1
TOP6A-Spo11_Toprim
PDZ_Tricorn
TRAF2_zf
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
140337148
NCBI-ProteinID:
XP_072276818
LinkDB
All DBs
Position
8:54148691..54307938
Genome browser
AA seq
1062 aa
AA seq
DB search
MGFELDRFNGEVDPDFKCNLCNRVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVKCQRIS
AKELNHVLPLKSLILKLEIKCDNQSRGCDKVVRLQNLGEHTEMCDFSPAKCRNKGCTEIL
NLKDMDAHMREFCEHRAVGICQKGCGLMLTHREQKLGDHCCLKAVKAHNGLLQTKISGLE
TELKKRALRSSKREKSLMSQLSAVQSELQMTALRYQKKFTEYSARLDSLTKTVASPCKGE
ETTALTLVLHRESGSLGFNIIGGRSCVDNQDGPSSEGIFVSKIVDSGPAAKEGGLQIHDR
IIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMYSPPAGVQMMDAGTQTEIT
FEHIMALTKISSPSPSVAALNPYLLNEEHSPLHEYFDPNDFMGGLHQDIDRDELELEEID
LYRLNSQDKLGLTVCYRTDDEDDTGIYVSEIDPNSIAAKDGRIREGDRIIQINGIDVHNH
EEAVALLTSEDTKAVFLLVARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTAS
MLEQKKIEEDGGTTDTATILSNQLEKDSGVGRTDESTRNDESSEQENIADDHTTSSNTLD
SQKKLMYSQDTLGSGDMQCSNESFISADCTDADFLGIPMDECERFRKLLELKCQVQSANQ
RSRYYQTSTMETNRSDQESVDRELEMLNEELHSIELECLNIVRTHKMQQLKEQYRESWML
HNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRR
TADAVLNGCPEGSASNLSYNALQKNVRSSGESRESSPARYIQTTKDSDANKPVETRDKKV
SELGKSQSSSEKQSSSFAPPYRHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSL
VSMCKDLQNSSEPRMEWKVKVRSDGTRYITKRPVRDKLLRERAIKIKEERSGMTTDDDAI
SEMKMGRYWSKEERKQHLRKASEQRKRREFMMQSRLECLKEKQTAEDNKEVSIIDLSHKK
MMKKRNKKIFDNWMTIQELLTHGTKSPEGTRVYNSLLSVTTV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgaattggatcgcttcaatggggaggtggaccccgattttaagtgcaattta
tgtaaccgagtcctggaggaccccctgaccaccccgtgcgggcatgtgttctgcgcaggc
tgcgtgctgccttgggtggtgcagcagggcagctgcccggtgaaatgccaacggatctct
gccaaggagctgaaccacgtgttacccctgaagagtctgattctcaaactggagatcaag
tgtgacaaccagtccaggggctgcgacaaggtggtcaggctgcagaacctgggggaacac
accgagatgtgtgacttctccccggccaagtgcaggaacaagggctgcaccgagatcctc
aatctcaaggacatggatgcccatatgagggaattctgcgaacaccgggcggtgggcatc
tgccagaagggttgtgggctcatgttgacccatagggagcagaaattgggggatcactgc
tgtctgaaagcggtgaaggctcacaatgggctcctacaaaccaagatctctgggctggag
acagaactcaagaagagggcactgagatccagcaagagggaaaagtccctgatgtcccag
ctgtcagcagtgcaaagtgagctgcaaatgacagcactcaggtaccagaaaaagttcaca
gagtacagtgccaggctggactcactcaccaagactgtggcttctccttgcaagggagaa
gagacgaccgcattgactctggtactccaccgcgaatctggatccctgggatttaatatt
attggtggacgttcatgtgtggacaatcaggacgggccctccagcgaaggaatttttgtg
tccaagatagttgacagcggcccagctgccaaggaaggcggccttcagatacatgacagg
attattgaggtaaatggaaaggatctatctagagccacccatgaccaggctgtggaagct
tttaagacggccaaagaacctattgtggtccaggttttacgaagaacccctcgcacaaag
atgtacagccctccagcaggcgtgcagatgatggacgcaggaactcagacagaaattact
tttgagcatattatggctctgaccaaaataagttccccatctccatcagtagctgcactg
aatccttatctcctaaatgaagagcactcgccacttcatgaatactttgaccccaacgac
ttcatgggaggtttgcaccaggacatcgacagagacgaactagaactagaggaaatagat
ttgtacagactaaacagccaggataagctggggctgactgtttgctacaggactgatgat
gaagatgatacagggatttatgttagcgagattgatcccaacagcattgctgctaaggat
ggccgaatccgagagggagatcgaataatacagattaatggcattgacgttcacaaccat
gaagaggctgttgctctgctcacaagcgaagacacaaaagctgttttcttactagtggca
agaccagaattgcagctggatgaaggatggatggacgatgacagaaatgattttctggat
gatctgcacatggatatgctggaggaacagcaccaccaggcaatgcaatttacagccagc
atgcttgagcagaaaaagattgaagaagatggtggaaccacagacacagcaaccatttta
tcgaaccagttggagaaggacagcggtgttgggcgtactgatgaaagcacccggaatgat
gaaagctctgagcaggagaacattgctgatgatcatactacgtcatcaaacacgctggac
agtcagaaaaagctcatgtacagtcaggacactttgggcagtggagacatgcagtgcagc
aatgagtcctttatatctgctgactgtacggatgctgacttcttgggaatccctatggat
gagtgcgagagattcagaaagcttcttgaactgaagtgccaagtccaaagtgccaaccag
cgaagtcgatattaccaaactagcactatggaaaccaaccgcagtgaccaggagagcgtg
gaccgtgaactggaaatgctgaatgaggagctgcatagcattgagcttgagtgcttaaac
atagtccgtactcataagatgcaacaactaaaagagcagtacagagaatcctggatgcta
cacaacagtggcttccgcaattacaacaccagcatagacgtgcgtcgtcatgagctctcc
gacatcaccgaattgccagagaagtcagacaaggacagctcaagtgcctacaacaccggg
gaaagctgccgtagcacccctctgactctagaaatttcccctgacaactcattgcgcagg
acagctgacgctgtcctcaacggctgtccagagggatcagccagtaacctttcttacaat
gcattgcagaagaatgtgcggtccagtggagaaagtcgagagtccagccctgccagatat
atccaaacaactaaggactctgacgcaaataagccagtggaaaccagagacaaaaaagtt
tcagaactgggcaaaagtcaaagttcttcagaaaagcaatccagttcttttgcaccacct
tatcgccattcaccctacaagcacgcccacatccctgcccatgcacagcactatcagagt
tacatgcaactgatccagcaaaaatcagcagtagagtatgctcaaagccagatgagcttg
gtcagcatgtgcaaagaccttcagaactcctcagagccaaggatggaatggaaagttaaa
gtacgtagtgacggaacacgttacatcaccaagagaccggtacgagataagttgttaaga
gagagagccataaagatcaaggaagagagaagcgggatgacgacagacgacgatgctatt
agtgaaatgaaaatgggacgttattggagcaaggaagaacgaaagcagcaccttagaaag
gcctctgaacagagaaagcgtagagagttcatgatgcagagcaggttggagtgcttgaaa
gagaaacagactgcagaggacaacaaggaggtcagcatcattgacctcagccacaaaaag
atgatgaagaaacgcaataaaaagatttttgacaactggatgacaattcaagaactgtta
acccacggaacgaaatctcctgaaggaactcgagtgtataactcgctactctccgtcact
actgtataa
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