Pyxicephalus adspersus (African bullfrog): 140337804
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Entry
140337804 CDS
T11284
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03008
Ribosome biogenesis in eukaryotes
pads03013
Nucleocytoplasmic transport
pads03015
mRNA surveillance pathway
pads05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140337804 (NXF1)
03015 mRNA surveillance pathway
140337804 (NXF1)
03008 Ribosome biogenesis in eukaryotes
140337804 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140337804 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140337804 (NXF1)
03009 Ribosome biogenesis [BR:
pads03009
]
140337804 (NXF1)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140337804 (NXF1)
mRNA cycle factors
Stress granule specific factors
140337804 (NXF1)
Ribosome biogenesis [BR:
pads03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
140337804 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
140337804
NCBI-ProteinID:
XP_072277718
LinkDB
All DBs
Position
9:complement(38685121..38717934)
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AA seq
621 aa
AA seq
DB search
MADSGRSYLDHDDRVGGNYFSKKRKGRGPFRAKMYSEGPPKYRNRGNCQPNPRSRLDDED
GDVAMSDVHETNRSRFNPYSRGGRRRDERQGRDRGASHGNASRDISHHDRTDARGDRNSW
FKITIPYGKKYEKDWLIGLLQSACSLPFSPIGYYCDHSRAHFYVEDAAVAKALKQISRTF
TDRENFKVTILTQPSQPPAQSKEMQMTEEEVTHFKLCMQKRYDGAQQALDMSSLRSDPDL
VANKVDIILNRKSCMQSMLQIIEENVPELLSLDLSNNKLYKLDHMSDIPVKAPNLKILNL
SNNVLKSEKDLDRIKALKLEMLWLDGNPLCDNFRDQITYISSMRERFPKLQRLDGHDLPP
PITFDVETPTTLPPCKGSYLATDNIKAIVLRFLQQYYAIYDGEDRQGLLNVYHDEACCSL
SIPIVSGPNPARSSLGDYFTNSRNLKRLRDPALRFKLLKHKRLNVVSFLNELPRTQHDLN
SFVVDVTAQTNTLLCFVVNGVFKVEGQSNDPVRAFTRVFIAVPGNEAGLLLVNDQQFIRN
ASTDEIRKAFATPAPTPSSSPVPVLAPVPQEIVQAFSQHSGMNLEWSQKCLQDNGWDWEQ
SVQIFMRLKAEGKIPDVAFIK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagtggccggagttatcttgaccatgatgaccgggttggtggaaattatttt
tcaaagaagcggaaagggcgtggcccattcagagcaaaaatgtacagtgaaggacctcca
aagtaccggaatcgtggaaattgccagcctaaccctcgttcccgactagatgatgaagat
ggggatgtggctatgagtgatgtacatgagaccaatcgatcacggtttaatccttacagc
cgtggaggcagaagaagagatgaaagacaaggaagagacagaggtgcttcacatggaaat
gcttctagagatatttcccatcatgatagaactgacgccagaggtgacagaaacagctgg
tttaagattacgattccatatgggaaaaaatatgagaaggactggttaattggtcttttg
caaagtgcctgttcactacccttttctcctatagggtactattgtgaccattctcgggcc
cacttctatgtggaagatgcagctgttgcaaaagctttaaaacagatctccaggacattt
acggaccgagaaaacttcaaggttactatacttacgcaaccttctcagccccctgctcaa
tcaaaggaaatgcaaatgactgaagaggaagttacacattttaagctctgtatgcagaaa
cgatatgatggcgctcagcaagctctggatatgagctcactgcgttctgatccagatctg
gtggcaaacaaagtagacatcatacttaacaggaaatcctgtatgcagagtatgctgcaa
attattgaagagaatgtgcctgagcttttatctttggatctcagtaataacaaactctac
aaactggatcacatgtcggacattcctgtgaaagctccaaatctgaagatcctaaacctt
tccaataatgtgctaaaatcagaaaaagatctggataggataaaggctctgaagcttgaa
atgctctggttggatggaaacccactctgcgacaattttcgagaccagattacatatatc
agttccatgagggaacgctttccaaaattacagcgactggatggacatgatctccctcca
ccaataacatttgatgtagaaaccccaaccacacttcctccatgcaagggcagctacctg
gctacagataatatcaaagcaatagttttgcgatttcttcaacaatattatgcaatctac
gatggtgaagatcgccaaggactgctaaatgtttatcatgatgaagcttgctgttctctc
agcattccaattgtgtcagggccaaaccctgccaggagcagccttggagactattttact
aatagcagaaatttaaagagactacgagatcccgcacttcgatttaaacttcttaagcac
aaacgtctcaatgtcgttagctttttgaatgaacttccacggacccagcatgatctgaac
tcttttgttgtggacgtcactgctcagactaatacattactttgctttgtggttaatgga
gtgtttaaggttgaggggcaatccaatgatcctgtacgtgctttcactcgggtgttcata
gcagtgccaggaaatgaagcaggacttcttttggtaaatgatcaacaattcataaggaat
gcaagtacagatgagattcgtaaagcctttgccacaccagctccaactccatcaagcagc
cctgtacctgttctggctcctgtaccccaggaaattgtgcaagcattcagtcagcactct
ggaatgaacctcgagtggtctcaaaagtgcctgcaggacaatggatgggactgggagcag
tcagtacagatttttatgaggctaaaggccgagggaaagattccagatgtcgcctttatc
aagtga
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