Pyxicephalus adspersus (African bullfrog): 140337979
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Entry
140337979 CDS
T11284
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140337979 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140337979 (CSTF3)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
140337979 (CSTF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
PRP6_TPR
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
140337979
NCBI-ProteinID:
XP_072277986
LinkDB
All DBs
Position
9:complement(50574876..50616536)
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AA seq
719 aa
AA seq
DB search
MMATGEGTSDQAAEYVPEKVKKAEKKLEDNPYDLDAWSILIREAQNQPIDKARKTYERLV
AQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYVSYVRETKGKLPSY
KEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVN
PMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYVNARRVAKEYETVMKGLDRNAPSVP
PQNTPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAA
QYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEK
THSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKAGRMIFKKAREDIRTRHHVYVTAALM
EYYCSKDTSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPP
EKSGEIWARFLAFESNIGDLASILKVEKRRYTAFKEEYEGKETALLVDRYKFMDLYPCSA
SELKALGYKDVSRAKLATLMPDPVVAPSIVPSLKDEIDRKPEYPKPDTSQMIPFQPRHLA
PPGLHPVPGGVFPVPPATVLLMKLLPPPLCYQGPFVQVDELMEIFRRCKLPDTVEEAIRV
ITGGQVELMQETNGPVEVSTLINKSLKRPNEDSDDDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatggccactggggaaggcacctctgaccaggctgcagaatatgttccagaaaaggtt
aagaaggcagagaagaaattggaagataacccatatgacctcgacgcttggagcattctc
attcgagaggcacagaatcagcctatagacaaagcccggaagacatatgagcgcttagtg
gcccagttcccaagttctggcagattctggaaactttacattgaagcagagattaaagct
aaaaattatgacaaggttgaaaagttgtttcagagatgcctcatgaaggtcttacacata
gacctatggaaatgttacgtgtcctatgttcgagagaccaaaggaaagcttccaagttac
aaggaaaaaatggcacaagcatatgactttgctctagacaaaattggcatggaaataatg
tcatatcagatctgggtcgattacatcaattttttgaaaggagtggaagctgtgggatct
tatgcagaaaaccaaagaatcacagctgtacgcagggtctatcagcgaggttgtgtcaat
ccgatgattaacattgagcagctctggagagattacaacaaatatgaagagggaattaat
atccaccttgcaaagaaaatgatagaagaccggagtagagattatgtgaatgccaggaga
gtggctaaggaatatgaaactgtgatgaaaggcttggatcgcaatgctccctccgtaccc
ccacagaatacccctcaggaagctcagcaggtagagatgtggaaaaaatacatacagtgg
gagaaaagtaatcccctccgtaccgaagaccagacccttataacaaaaagagttatgttt
gcttatgagcaatgcctattggtgttggggcatcatccagacatctggtatgaagctgca
cagtacctggaacaatccagcaagctgctagccgagaaaggggatatgaataatgctaaa
ctgttcagtgatgaagctgccaatatttatgaacgtgcaattagtaccttgttaaagaaa
aacatgctgctgtattttgcctatgctgattatgaagagagccgcatgaagtatgagaaa
actcacagtatatataacagacttcttgccatagaggacatagaccccactttggtttat
atccaatacatgaaatttgcaagacgggcagagggcatcaaagctggacgaatgatcttc
aaaaaagccagagaagatatccggacgcgccatcatgtatacgtcacagcagccttaatg
gagtattactgtagtaaggacacttcagtggccttcaagatatttgagttaggactgaag
aaatatggagacatccctgaatatgttctggcttatattgattatttgtctcacctcaat
gaggacaacaacacaagggtattatttgaacgagttttaacatcaggtagtctgccacct
gagaaatctggtgagatatgggcccgattcttggcatttgagagtaatattggagattta
gccagtatactgaaagtagagaagaggagatataccgcatttaaagaagagtatgaaggg
aaggagacagcattgttggtggacagatacaagttcatggatctgtacccttgttctgca
agtgaactcaaagctttaggatataaggatgtctcccgtgccaaattggctactttaatg
ccagacccagtggtggctccttcaatagtcccatccctaaaggatgagattgacagaaaa
cctgaataccccaaaccagataccagccagatgatccctttccaaccaagacacctagct
cctcctggacttcacccagtgcctggaggggtcttcccagtgcctcctgctactgtgcta
ttaatgaaactgctccctccacctctgtgttaccagggtccttttgtgcaggttgatgaa
cttatggagatctttcgccggtgtaagcttccagatactgttgaagaggcgatcagagtc
attacggggggtcaggtagaacttatgcaggagaccaacggaccagttgaagtgagcacc
ctgattaacaaatcactcaaaagacccaacgaggattctgatgatgatgaagaaaagggt
gctgtagtgcctcccgttcatgatatctacagagctcggcagcagaagaggattcggtga
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