Pyxicephalus adspersus (African bullfrog): 140338529
Help
Entry
140338529 CDS
T11284
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04120
Ubiquitin mediated proteolysis
pads04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140338529 (SYVN1)
04120 Ubiquitin mediated proteolysis
140338529 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pads04121
]
140338529 (SYVN1)
Enzymes [BR:
pads01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140338529 (SYVN1)
Ubiquitin system [BR:
pads04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140338529 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-RING_Vps41
Endonuclease_7
zf-Nse
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
140338529
NCBI-ProteinID:
XP_072278876
LinkDB
All DBs
Position
9:complement(35394655..35411336)
Genome browser
AA seq
508 aa
AA seq
DB search
MMRTAVMTGASLALTAAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRILALMLLLGVLDVLFVSHSYHSLVTRGASVQLVFGFEYAI
LMTMILTVFIKYVLHSVDLQSENPWDNKAVYMLYTELLTGFIKVLLYMAFMTIMVKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAETPTPADQPDPAQQPHAAPA
QQTPIIPPQPNFPPGMLPPFPPGMFPLWPPLGPFPPVPGANAPDETATAGPSTGKLLAFF
LLPPRPSVPSTQSQPAPTDASPSSNAKETPSADTPLEVGPSNGTATPESANEEITNGAED
GSSTEEPDAAELRRRRLQKLETGSTESH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggacagcggtgatgacgggtgccagtctggcacttacagcggcggtggtagca
catgcctattaccttaagcaccagttctacccaacagttgtctatctaaccaaatcaagc
cccagcatggctgttctctacatacaagcatttgtcctggtcttcctgttaggaaaattt
atgggaaaggttttctttggtcaattgagagcagctgagatggagcaccttctggagcgt
tcttggtatgctgttacagaaacatgtttggctttcacagtatttcgggatgattttagc
cctcgctttgtagcactcttcactcttctactcttcctcaaatgtttccactggctggct
gaggatcgtgtggattttatggaacgcagtccaaacatttcatggctgtttcatttccgt
attctagcactgatgctcttgctgggtgtgctggacgttttgtttgtgtctcattcttat
cacagtttggtcacccgtggggcctctgttcagctagtttttggttttgagtatgccata
cttatgaccatgatcctcactgtgttcataaaatatgttctacactctgtggacctgcag
agtgaaaacccatgggataacaaagccgtctacatgttatacactgaacttctgactggc
tttataaaagttttgctgtatatggcttttatgacaattatggtcaaagtccacacgttt
cctttgtttgcaatccgcccaatgtaccttgcaatgagacagtttaaaaaggctgtgaca
gatgccatcatgtcaagaagagcaatccgcaatatgaacacactgtatcctgatgccact
ccagaagagctccaggcgatggataatgtgtgtatcatttgcagagaggaaatggtgaca
ggcgcaaagagactaccatgtaaccacatattccacacaagctgcctgcgttcctggttc
cagaggcagcagacatgtcctacttgccgcatggatgttctcagagcttctctccctgct
gagacaccaacacctgctgaccagcctgatcctgcccagcaaccacatgctgctcctgca
cagcaaaccccaattattcctccacagcccaactttcctcctgggatgctccctcctttc
ccccctggcatgtttcccctttggccaccactgggtccttttccaccagttcctggagct
aatgcccctgatgaaacagcaactgcaggaccttccactggtaagttactggcttttttt
ctactcccccctcgtccttctgtcccttccacacagtcccaaccagcacccacagatgct
tctccctccagtaacgccaaagaaactccttctgcagatacaccattggaagttgggcca
tctaatgggacagctacccctgaatctgccaatgaagagataacaaatggtgctgaagat
ggttcatcgacagaggaaccagatgcagcagaactacgccgacgtagacttcagaaattg
gaaactggttccactgaatctcactga
DBGET
integrated database retrieval system
