Pyxicephalus adspersus (African bullfrog): 140339585
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Entry
140339585 CDS
T11284
Symbol
CACNA1S
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04010
MAPK signaling pathway
pads04020
Calcium signaling pathway
pads04260
Cardiac muscle contraction
pads04261
Adrenergic signaling in cardiomyocytes
pads04270
Vascular smooth muscle contraction
pads04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140339585 (CACNA1S)
04020 Calcium signaling pathway
140339585 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
140339585 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
140339585 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
140339585 (CACNA1S)
04270 Vascular smooth muscle contraction
140339585 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pads04040
]
140339585 (CACNA1S)
Ion channels [BR:
pads04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
140339585 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
DUF2670
PRIMA1
Motif
Other DBs
NCBI-GeneID:
140339585
NCBI-ProteinID:
XP_072280453
LinkDB
All DBs
Position
1:complement(113666839..113729401)
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AA seq
1686 aa
AA seq
DB search
MDARGPAAEEGTQKKKKKPLVPPSPRPPRALFCLGLQNPFRKTCINIVEWKPFEMIILLT
IFANCVALAIYLPMPEDDTNSTNSVLEKVEYIFLFIFTIEAFLKIVAYGFILHTDAYLRN
GWNILDFTIVSVGVFSVVLEQINKLQGIPAPGKSSGFNVKALRAFRVLRPLRLVSGVPSL
QVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGLELFSGKMHKTCYFKNTDIIATVENEEP
APCSSTGQGRQCSINGTECRGWWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYWVN
DAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGAFQKLREQQAMDED
LRGYLDWITHAEVMDPDMEPGDGFSQLEEGGSETDSLYEIEGINKCIAFFRQWRQWHRLL
RRKSRALVKSRFFYWLVIIIILLNTVIIATEHHNQHESLTRAQDIANQVLLALFTMEMVV
KIYALGFQSYFMSLFNRFDYFVVCTGLLEIMLVASDIMSPLGISVLRCIRLLRIFKITRY
WTSLNNLVASLLNSVRSIASLLLLLFLFMIIFALLGMQMFGGKFDFEDDKIRRSNFDTFP
QALITVFQVLTGEDWNSVMYNGIMAYGGPSFPGMSVCIYFIFLFVCGNYILLNVFLAIAV
DNLAEAENLTSAQKAKSEERKRKKLARAFPDKSEEEKLLLAKKLEQKAKGEGIPTTAKLK
IDEFESNVNEIKDPYPSADFPGDDEEEEPDIPLSPRPRPLAELQLKEKAVPMPEASSFFI
FSPTNKIRVLCHRIVNATTFTNFILLFILLSSISLAAEDPIRPDSFRNQILSYFDIVFTV
IFTTEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVGVSLISMGIEXSTTFVLSLHVLTHG
SNNCNFFLLQHVVQCVFVAIKTIGNIVLVTTLLQFMFSCIGVQLFKGKFYSCTDTTKITE
EECKGHFFVAKDGNPSHLEAVPRLWMHSAFHFDNVLSGMMSLFTISTFEGWPQLLYRAID
SHTEDMGPIYNYRIEIAVYFIIYIILIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQ
RQCVQYALKARPLRRYIPKNPHQYKIWYLVTSSYFEYLMFLLITLNTISLGMQHYGQTPE
FSHVSDILNVAFTGIFTVEMLLKLAAFKAKGYFGDPWNVFDFLIVIGSIIDVILSEIDTP
GIPAIPGADESSRISITFFRLFRVLRLVKLLSRGEGVRTLLWTFIKSFQALPYVALLIVM
LFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEILLACSYGK
LCDPESEYLPGEEYTCGTSFAYFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGP
HHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPLN
SDGTVTFNATLFSLVRTALKIKTEGNFEQSNEELRMIIKKIWKRTSMKLLDQVIPPIGDD
EVTVGKFYAIFLIQEHFRKFKKRQEEYYGYRPKKSANNVEIQAGLRTIEEEEGEGELHRT
ISGDLTPEEELERAMVEAAIEEGIYRRTGGLFGQEDSFHTEPVSPLQTTVTSQRPLRFSE
AGSEELDSPVFLPEPVFFPPPRRNRNTNNSTISRGLNQRLGTPDFERVQHNEEQWDTNSN
ISQATN
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagaggaccagcagccgaggagggcacacagaagaaaaagaagaaaccctta
gtgccaccatccccacgtcctcctcgggcattattctgcctcggacttcaaaacccattt
aggaaaacatgcataaacattgtagaatggaaaccttttgagatgattattcttcttacc
atttttgccaattgtgtggctttagcaatctacttgcccatgccagaggatgacaccaac
tctaccaactctgtcttggagaaggttgaatacatcttcctgtttatatttactattgaa
gcatttctgaagatagtggcctatggattcatattacataccgatgcttaccttcggaat
ggctggaatattttagattttaccattgtttctgtaggagtcttcagtgtggtcctggaa
cagattaacaagcttcagggcatacccgccccaggaaaaagttctggatttaatgtgaag
gctctgagagcatttcgtgtcctaaggcccctgcgtctagtctctggggtacccagcctt
caagtggtacttaattccatcattaaggcaatggtaccccttctgcacatagctcttctg
gtgctttttatgattattatatatgcaattgttggacttgagctgttttctgggaagatg
cacaagacctgttatttcaaaaacacagatataatagccacagtggaaaatgaggaacct
gccccatgcagtagtacaggccaaggccgtcagtgctcgataaatggaacagagtgtagg
ggatggtggcctgggcccaataatggcattactcattttgacaattttggctttgccatg
ttgactgtataccaatgcataactatggaaggatggacagaagtactttactgggttaat
gatgctattggcaatgagtggccctggatttactttgtcagtcttatccttctgggatcc
ttctttgtgcttaatttagtgctcggtgtcctgagcggtgagtttaccaaggagcgtgaa
aaagccaaatcaagaggtgcattccagaaactaagagaacagcaggcaatggatgaggac
ttgcgtggttatttggactggattacacatgcagaggttatggatccagacatggaacca
ggagatgggttctcacagttggaggaaggtggttcagaaactgacagcctctatgaaata
gaggggatcaacaaatgtatagcttttttccgtcagtggcgccaatggcatagactgctt
cgccgaaaaagtcgagctcttgtgaaatcccgtttcttttattggcttgtcattattatt
attcttcttaacacagtcattatagcaactgagcaccacaatcagcatgaatctctaaca
agagctcaagatattgcaaatcaggtgttgctagctctctttaccatggagatggttgta
aaaatatatgcccttggtttccagtcatattttatgtcacttttcaaccggtttgactac
tttgtagtatgtactggacttcttgagatcatgctggtggccagtgatataatgtcgcct
cttggaatatctgtcctacgttgcatacgactacttcgaatattcaagattacacgatac
tggacttcactaaacaacttggtggcttctttgctgaactctgtccgctctatagcatca
cttctactactacttttcctctttatgattatttttgctctccttgggatgcaaatgttt
ggtgggaagtttgactttgaggatgataaaatcagaaggagcaactttgatacttttcct
caagcccttattactgtctttcaggtcttgactggagaggactggaactcagtaatgtat
aacggaattatggcttatggtgggccatccttccctgggatgtctgtctgcatttacttt
atctttttattcgtttgtggaaattacatcctacttaatgtgtttcttgctattgctgtt
gataaccttgcagaggctgaaaaccttacctctgcgcagaaagcgaaatcagaagaacgg
aaacgcaagaaactggcaagagcatttccagataaatcagaggaagaaaaactgttgtta
gcaaagaagttggaacaaaaagcaaaaggtgaaggaatacctactacagccaagctaaag
atagatgaatttgagtctaatgtgaatgaaataaaggatccttatccttctgcagatttc
ccaggtgatgatgaggaggaagaaccggacatcccattaagtcctcgccctcgtcctctt
gcagaactacagttaaaagaaaaggcagtgccaatgccagaggccagttctttcttcata
tttagccccaccaacaaaatccgagtactgtgtcatcgtattgtcaatgctactactttc
accaatttcatactactctttatcttacttagtagcatctctttggctgctgaagatccc
attcgacctgactctttccgtaaccagattctttcctattttgatattgttttcactgtg
attttcacaactgaaattgttcttaagatgacaacatatggtgctttccttcacaaaggt
tctttctgcagaaattattttaatatattggaccttttggtggttggagtttctctcatt
tcaatgggaattgagntaagcactacatttgttctttccctgcatgttctaactcatggt
agcaataattgcaatttttttttgctacagcatgtggtccagtgtgtatttgttgccatt
aaaacaatcgggaatattgtcctggtcacaacacttttgcagtttatgttttcttgcatt
ggtgtacagctgttcaagggtaaattctacagctgcactgatacaactaaaatcacagag
gaagaatgcaagggacattttttcgtggcaaaggatggaaatccatcccatttggaggcg
gtacccagactttggatgcatagtgctttccattttgataatgtcctttctggaatgatg
tctcttttcacaatttccacatttgagggctggccacagttactgtacagagccatcgac
tcgcacacagaggatatggggcctatctataattaccgcatagaaattgcagtctatttc
attatctatattatactcattgccttctttatgatgaacatctttgttggatttgtcatt
gtcaccttccaggaacaaggagaacaggaatataaaaattgtgagctagacaagaatcag
agacaatgtgtacaatatgccttgaaagcccgtcctttgcggcggtacatcccaaaaaat
ccacaccaatataaaatctggtatttggtgacctcttcatacttcgagtatctaatgttt
ctgcttattacgctgaataccatcagtcttggcatgcagcactacgggcagactccagag
ttcagtcatgtgtctgacatccttaacgtggcctttactggaatctttacagtagaaatg
ctgctcaagctggcagcattcaaagcaaagggttattttggagacccatggaatgtcttt
gatttcctcattgttataggaagcataattgatgtaattctcagtgagattgatactccg
ggtatccctgccattccaggagctgatgagtcctcacgaatttccattacctttttccgg
ctgttccgtgttttgcgtttagtgaaattattgagtcgaggagagggagtcaggactctg
ctctggacctttataaaatccttccaggcacttccatatgtagccctactcattgtaatg
ctgtttttcatctatgcagtcattggaatgcaggtttttggtaaaattgcaatggttgat
ggaacacaaataaatcggaacaacaatttccagacgttcccccaggctgtgttattactt
tttagatgtgccactggggaggcctggcaagagatattgttagcttgctcctatggaaag
ctgtgtgatccagagtcggaatatctgccaggcgaagaatatacatgtggaacaagtttt
gcatacttctacttcattagtttctatatgttgtgtgccttcctgattatcaatcttttt
gttgctgttatcatggacaactttgactatctaacccgcgattggtcaattttgggccca
catcatttggatgaatttaaaagaatttgggccgaatatgaccctgaagcaaagggaaga
atcaaacatttagatgtagtaactcttttaagaagaattcagccacctctgggatttgga
aaattctgcccacacagggtggcttgtaagagattggtcagcatgaacatgccattgaat
agtgatggcacagtcaccttcaatgctactttattttcacttgtgaggacagcgctaaaa
atcaaaactgaaggtaattttgaacagagtaatgaagagctcagaatgatcataaagaaa
atttggaaaaggaccagcatgaagctactggaccaggttattccaccaattggagacgat
gaggtgactgttgggaagttttatgccatcttcctgatacaagaacatttccgaaagttc
aagaaacgccaggaagagtattatggatacaggcctaaaaaaagtgcaaataatgtggaa
atacaggctggtttacgtacaatagaagaagaggaaggggaaggtgaactacaccgtact
atttctggagacctgaccccagaggaggaattagaaagggctatggtagaggcagctatt
gaagaaggcatctatcggaggactggtgggctatttggacaggaagacagctttcatacc
gaacctgtaagccctctgcaaacaacagtcaccagccaacgaccattaagattttcagaa
gcaggaagtgaggagttggattctcctgtttttctaccagaacctgttttttttcctcca
ccaagaaggaaccgtaacacaaacaacagcacaatttcaagggggttaaatcagagactt
ggaactccagactttgaaagagtacaacataacgaagaacagtgggataccaacagtaac
ataagccaggcaaccaattga
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