Pyxicephalus adspersus (African bullfrog): 140339622
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Entry
140339622 CDS
T11284
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140339622 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140339622 (EXOSC1)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
140339622 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
140339622 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
GULLO2-like_3rd
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
140339622
NCBI-ProteinID:
XP_072280492
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All DBs
Position
10:9522544..>9529786
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AA seq
194 aa
AA seq
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MASVKWCVPGERLSSLEDCAPGFGTYCKHGYIFASLAGYVVKTSDNGLMPVLCVVRDTDS
LLLPEVGCTVTCKVMSINPRFGKVQIMYIGTRPLKNTFKGTIRREDIRATEKDKVEVYKS
FRPGDIVIAKVISMGDTQSSYLLSTAENELGVVVARSEAGAIMVPISWCEMQCPKTHIKE
PRKVARVQPEFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggtgaagtggtgtgttcctggtgagaggctgtctagtctggaggattgtgca
ccaggatttgggacttactgcaagcatggctacatctttgcctcactcgctggttacgtt
gttaagacaagtgacaacggtttgatgcctgtgttatgtgtagtgcgggacacagattca
cttcttctgccagaggtgggctgcactgtcacatgtaaggtaatgagcataaacccaaga
tttggtaaagttcagataatgtacattggcacaagacccctcaaaaacacctttaaaggc
acaatcagaagggaagatatcagagcaacagaaaaagacaaggttgaagtttacaaatct
tttcggccaggagatattgtcatagcaaaagttatatccatgggagacactcaatccagt
tacctgttaagcacagcggaaaacgagcttggagtggtagttgcacggagtgaagctgga
gcaatcatggtgcctatcagctggtgcgagatgcagtgccccaaaacacacatcaaggaa
ccccggaaggtggcacgagtacagccagagtttttgcagacctaa
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integrated database retrieval system
