Pyxicephalus adspersus (African bullfrog): 140339722
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Entry
140339722 CDS
T11284
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140339722 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pads03021
]
140339722 (TAF5)
03036 Chromosome and associated proteins [BR:
pads03036
]
140339722 (TAF5)
Transcription machinery [BR:
pads03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140339722 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
140339722 (TAF5)
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140339722 (TAF5)
STAGA complex
140339722 (TAF5)
TFTC complex
140339722 (TAF5)
SAGA complex
140339722 (TAF5)
SLIK complex
140339722 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_Nup120_160
WD_LRWD1
eIF2A
PEP5_VPS11_N
VPS8_N
LisH_TPL
LisH_PAC1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
140339722
NCBI-ProteinID:
XP_072280631
LinkDB
All DBs
Position
10:19625295..19637262
Genome browser
AA seq
756 aa
AA seq
DB search
MAAVPDEASTSVKTEPELLEDVKNESLSVPVSEEPVLGNGHGVSPKAASPPVAPLTTPEA
PDRQTLLAVLQFLKKSNLKDSADILRRECGLQEVEESPALSPGGQNLSGELDGEHSLLSR
VTSAAISVTGGATGQTGTAGKVLLNSGPQDQPDVSAVLSAYTQQGDPALYEEYYGGLKRF
IESVLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFDKFHGDQECYYEDDLRILAS
LTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWSIVQEHLYIDIFDG
MPRSKQQIDAMVGSLSGEAKREANKVKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKK
PKKDSIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMIMKEAAKRVRLGPDSLPSICFY
TFLNAYQGLTAVDVTDDSSMIAGGFADSTVRVWSLTPKKLRSVKSTSDLSLIDKESDDVL
ERIMDEKTASEMKVLYGHSGPVYATSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVAYKGH
NYPVWDAQFSPYGYYFVSGGHDRIARLWATDHYQPLRIFAGHLADVICTRFHPNSNYVAT
GSTDRTVRLWDVLNGNCVRIFTGHKGPIHVLAFSPNGKFLASGGTDGRVLLWDVGHGLMV
GELKGHTNTIYALKFSRDGEVLASGSMDNTVSLWDAVKAFEDLETDDFTSATGHLTLNEN
SQELLLGSYMTKSTPVIHLHFTRRNLLMAAGAYGPQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgccagatgaggcgagtacctcggtgaagacggaacccgagctcctggag
gatgttaagaatgagagcctgtcggtgcccgtctccgaagagccggtgctggggaacggt
catggcgtctctccgaaagccgccagtccaccggtggccccgctcaccaccccggaggct
ccggaccggcagacgctgctggccgtgctgcaatttctcaagaaaagcaacttgaaggat
tccgccgacattctccgccgggagtgcggactgcaggaggtggaggagagcccggcgctc
agccccggcggacagaacctcagcggggagctggacggggaacacagcctgctgagccga
gtcaccagtgccgccatctccgtcaccgggggagccaccgggcagaccggcacagcgggg
aaagttctattgaatagtggcccgcaggaccagccggatgtcagtgcggttctatctgct
tacacccagcaaggagatccagctctgtatgaggaatattacggtggcctgaaacgattc
attgagtcagtactggattgtcatcgtgcagagctttctcagttattctacccactcttt
gtgcacatgtatttggagctggtctacaatcaacatgaaaatgaagccaaatctttcttt
gacaaatttcatggagaccaggaatgttactatgaggatgacctccgcattttagccagc
ctcaccaagaaggagcacatgaaaggcaatgaaaccatgttagactttcgaacaagcaag
tttgtactaagaatatcccgggactcctatcagctgcttaagcgccatttacaggagagg
cagaacaatcagatatggagcatagtacaggaacacttgtacattgatatttttgatggc
atgccacgtagcaaacaacaaatagatgccatggtgggcagcttgtctggggaagccaag
cgtgaagcaaacaaagttaaggtgttctttggtcttttgaaagaaccagagattgaagtc
cctttggatgatgaagatgaggaaggagaaaatgaagaaggaaagccaaagaaaaagaaa
ccaaaaaaagatagcattggctcgaaaagcaagaaacaggaccctaatgcaccacctcag
aacaggattcctctccccgagctaaaggattctgacaaacttgataagattatgattatg
aaggaagctgccaaacgggttcgccttggccctgattcactcccctcaatctgtttttac
acattccttaatgcttaccagggtttgaccgcagtggatgttacagatgattccagcatg
atcgcaggaggatttgcagattctactgtgcgcgtgtggagtttaacgcccaaaaaatta
cgaagtgtcaaaagcacatctgatctcagcttaatagacaaagaatcggatgatgttcta
gaaagaattatggatgaaaagacagcaagcgagatgaaggttttatatggccacagcggg
ccagtctatgcaaccagcttcagtccagacaggaattacttattatcttgctcagaagat
ggcactgtccgtttatggagtcttcagacattcacctgcttggtggcatacaaagggcat
aactacccagtgtgggatgctcagttctctccatatggatattactttgtgtctggaggc
catgacagaattgctcgcttatgggcaacagaccattaccagcctttacgtatatttgct
ggccatcttgcagatgttatatgtactcgctttcatcccaactctaactacgtagctact
ggctcaacagacagaacagtcagattatgggatgtcctaaatggaaattgtgtaaggatt
ttcaccggacacaagggaccaattcacgtcttggcgtttagtccaaatggaaagttctta
gctagtgggggcaccgacggcagagtcttgctttgggatgttggccacggtttaatggtt
ggagaattaaagggtcacactaacacaatctatgcacttaagtttagccgtgatggagag
gttttagcatcaggttctatggataatactgttagtttgtgggatgcagtaaaagccttt
gaagacttagaaaccgatgactttacaagtgctacaggacatttaactttaaatgaaaat
tcacaagagctactccttggttcctatatgacaaaatcaactccagttattcatcttcat
ttcactcgacgaaaccttctcatggctgctggagcttacggcccacaatga
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integrated database retrieval system
