Pyxicephalus adspersus (African bullfrog): 140340332
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Entry
140340332 CDS
T11284
Symbol
SMG9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140340332 (SMG9)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
140340332 (SMG9)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
DUF6079_1st
URGCP_GTPase
NB-ARC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
140340332
NCBI-ProteinID:
XP_072281540
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Position
11:8211227..8223198
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AA seq
499 aa
AA seq
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MSDSGHSQPSMYVPGRSRRRRWMDQGPSGNLNLSEPPRERDPMDGNDENSGYTMQKTPII
LAKPSAERPKPAPAPAPAAPEKPIVLMKAREDGKPAPTTEGATLPPSASTAKVEKEGQRP
TQPVYQIQNRGMGSAANAGGNVDPVVGQAKLMPPQKMKHSIKLVDEYMNWCDSAIEFLLD
QTDVLVVGVLGFQGTGKSTMMSLLSANSPDDDQRSYVFRMQSQEVRERAGNQTSGIDFFI
SQERIIYLDTQPILSPAILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFLFTVCHVVIV
VQDWFTDFSIYRFLQTAEMLKPSTPSPSHESSGSSGADEGIEYYPHLVFLQNKARREDFC
PRSLKQMHTATDKLMMHSRLRYKGTLSMLDCNIFPGLPYDFLESEVNLFLVPVMENETDE
TISRAGTAGNPLFSLLPGYKGHPNFHTMISKLRSQIMSMPRPQLSHTILTEKNWFHYAAR
IWDGVKKSSALSEYSRLLG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctgggcacagccagcctagtatgtacgttcctgggcgcagcagaagacgc
cgttggatggaccagggaccctccggcaaccttaacctgtccgaacctccgcgagaaaga
gaccccatggatggaaatgatgagaattctggctacaccatgcagaagacccctatcatc
ttggctaaaccttccgctgagcgtccaaagccggcccctgctccagctccagcggcacca
gaaaagcctattgtccttatgaaagccagagaggacggtaaaccagcgccaacaacagag
ggtgccactctgccaccatctgcctctacagcaaaagtggaaaaagaaggacagcgcccc
acacagccagtgtaccagattcagaatcgaggcatgggcagcgctgccaatgctggtgga
aatgttgatcctgtggttggccaggctaaactgatgcctcctcagaagatgaaacacagc
atcaagctggtggatgaatacatgaattggtgtgacagtgccattgagtttttgctggat
cagacagatgtccttgtggtgggagttcttggatttcagggtacaggaaaatcaacgatg
atgtcccttctttctgccaactccccagatgatgaccagagatcatatgttttcagaatg
cagagtcaagaggtgagggagagagccggtaaccagactagcggaatagactttttcatc
agccaggagaggataatctacctggacacacagcccattctgagccctgcaatattggat
cacttaatcaataatgatcgaaagctacctccagagtacaaccttccacacacctatgtg
gagatgcagtcactacaaattgctgccttcttgttcactgtgtgccacgtggttatcgtt
gtccaagattggttcactgacttcagcatataccgatttcttcagacggctgaaatgctg
aagccgtccacaccgtcccccagccatgagtccagtggctcgtcaggggcagatgaaggc
attgagtactacccccaccttgtgtttctccagaataaagccaggagggaggacttctgt
ccccgcagcctgaagcagatgcacacggcgactgacaagttaatgatgcactcccggctc
cgttataaaggcaccctctccatgctggactgtaatatcttcccaggattaccttatgac
ttccttgagtcagaggtgaatttgtttttagtcccagtgatggagaatgaaactgatgaa
accatctccagagcaggcacagcagggaaccctctcttctcactccttcctgggtataag
ggtcaccccaactttcataccatgatcagcaaactgcggagtcagatcatgtccatgcca
cgtccgcagctctcacatactatcctcactgaaaagaactggtttcactatgctgctcga
atctgggacggggtgaaaaagtcttcagcgttatcagaatacagcagactgttggggtag
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