Pyxicephalus adspersus (African bullfrog): 140340552
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Entry
140340552 CDS
T11284
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140340552 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140340552 (CNOT3)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140340552 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140340552 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
Motif
Other DBs
NCBI-GeneID:
140340552
NCBI-ProteinID:
XP_072281923
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Position
11:18238442..18279138
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AA seq
727 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEIGQWLTSTIDTLNMGVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
IRMLETILRMLDNDSINVDAIRKIKDDVEYYVDSSQEPDFEENEFLYDDLDLEDIPQALA
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKIRGRSTDSEVSQ
SPAKNGSKVIHNNHHPQSPAVTPSYQIGSSSSTSSSLGNGPGTNSNGTVSNSSSSTNSNS
STNNKNNPPSGHTSGTPTPYAQAVAPLPSNSNASQPRPPNVQQNTSKQNGATSYSSVVAE
NATDAALSNSSQSQSSQSVIHNPPTSTAKEANSVSLPSSNNSTTSTGSSLLLPLCVNSPS
SPTPSFSDPKPSQPLLNGPPQFSSTPEIKTPEPLSTLKSMAERAAIATNLEDQVPAIHLA
EREILITTTTTQPPASQSTTQLTEVSIPLSLGVCPLGPVPLTTDQLYQQAMQEAAWHHMP
HPSDSERIRQYLPRNPCPTPQYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYL
AAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRY
LEDRDLQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagagaaaactacagggcgagattgatcggtgcctcaaaaaagtttctgaa
ggagttgagcagtttgaagacatctggcaaaagcttcacaatgcagcaaatgcaaaccag
aaagaaaaatacgaggcagatttgaagaaggaaatcaagaaactacagcgattgcgggac
caaataaagacatgggtagcatccaatgagatcaaagacaagaggcagctcattgaaaac
cggaaactaatagagacgcaaatggaaaggtttaaggtagtagaacgtgaaacgaaaaca
aaagcatactctaaggaaggtcttggcttggctcagaaggtggacccagctcagaaggaa
aaagaagaaattgggcaatggctaacgagcacaatagacacattgaatatgggtgtggat
cagtttgaaagtgaagtggaatctttatctgtacaaacacgaaaaaagaaaggcgacaag
gatcagaagcaggacaggatcgagggattaaaacggcatatagagaagcataggtatcac
attcgaatgctagaaaccatcctgcgaatgttggataatgactctatcaatgtggacgcc
atcaggaagattaaggatgatgtagaatactacgtggactcttcccaggaacctgacttt
gaggaaaatgagttcttgtacgatgaccttgatttagaagacattccacaggcactggca
gctacttcaccaccgagtcacagtcacatggaggatgaaatcttcaatcagtctagtagt
actcctacctccaccacatcaagctctcctattccaccaagtcctgcaaattgcacgact
gaaaactctgaagatgacaagaaaattcgtggcaggtctacggacagtgaagttagtcag
tcaccagcaaagaacggatctaaagttatccataacaatcatcatccacagtcccctgca
gtgactccaagttaccaaataggaagcagttccagcacgtcatcttctctaggaaatggg
ccaggtaccaacagcaatggcacagtttcgaacagcagcagcagtacgaacagtaacagc
agtactaacaacaaaaacaaccctccaagtggacacacatctggtacacctaccccttat
gcacaagcagtggctcctctcccctctaattcaaatgcatcccagcctaggcctcccaac
gtccagcaaaacacaagtaaacaaaatggagcaacaagttacagctctgtagtagcagaa
aacgccacagatgctgcgcttagtaatagcagtcaatcacaatcaagccagtctgtgatt
cacaacccaccaacaagcactgcgaaagaggcaaacagtgtatctctgccatccagcaac
aacagtactaccagcactggctccagtttacttttgcccttatgtgtaaactctccaagt
tcaccaacaccaagtttcagtgaccctaaacccagtcagccactacttaacggcccacct
cagttcagttctacgccagagataaagactcctgagcccctaagtacactgaaatctatg
gctgaacgagccgctattgcaacaaatttagaagatcaagtgcctgctatccacctggct
gagcgagaaattctcatcactacaactacaacacaaccacctgccagccaatccacaaca
caacttactgaagtgagcatccctctttcactgggtgtgtgtcctttgggtcctgtccca
cttaccacagatcagctttaccaacaagcaatgcaagaggctgcgtggcatcatatgcca
catccatcagattcagaaagaatacggcagtacctcccaaggaatccatgtccaacacct
caatatcaccatcagatgcctccacctcattcagacacagtggaattctaccagcgactt
tccacagaaactcttttctttatcttctactacctggagggcactaaagcacagtattta
gctgctaaagcattgaagaaacagtcttggagatttcacaccaaatatatgatgtggttt
cagaggcatgaggaacccaaaacaataactgatgagtttgagcaggggacatacatatac
tttgactatgaaaaatggggccagcggaagaaggaaggttttacttttgagtatcgatat
ctggaagaccgcgatttacagtga
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