Pyxicephalus adspersus (African bullfrog): 140340902
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Entry
140340902 CDS
T11284
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pads03000
]
140340902 (YBX1)
03019 Messenger RNA biogenesis [BR:
pads03019
]
140340902 (YBX1)
03041 Spliceosome [BR:
pads03041
]
140340902 (YBX1)
Transcription factors [BR:
pads03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
140340902 (YBX1)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
140340902 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
140340902 (YBX1)
Spliceosome [BR:
pads03041
]
Common components
Common spliceosomal components
General mRNP proteins
140340902 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
140340902
NCBI-ProteinID:
XP_072282439
LinkDB
All DBs
Position
11:complement(45750025..45754758)
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AA seq
298 aa
AA seq
DB search
MSSDVETQQQPAALESKSGPEPAATVGEKKVIATKVLGTVKWFNVRNGYGFINRNDTKED
VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRN
YRRYPRRRGPPRNYQQNYQNEGGEKTEVTEGSGDGANQQRPFRRRRYPPYYFRRPYGRRP
QYSNPPAQGEGAEGAENQGAGDQARPVRQNMYGGFRPRFRRGPPRQRRPREDGNEEDKEN
QGEGTQSQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAAETSAENTSAPEAEQGGAE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgacgtggaaacacagcagcagccagccgccttggagagcaagtccggcccg
gaaccggcggccactgtgggggagaagaaggtcatcgcaaccaaggttttgggcactgtc
aaatggtttaatgtgcgcaatggatacggatttattaacaggaatgacaccaaggaagat
gttttcgttcaccagactgccattaagaagaacaacccaaggaagtatcttcgcagtgtg
ggagatggagaaactgtagaatttgatgtagtggagggagagaagggtgcagaggcagct
aatgtaactggtcctggtggcgttccagtccaaggtagcaaatatgcagcagatcgcaat
tacagacgctatccacgtcgcagaggtcctccacgtaattaccagcaaaactatcaaaat
gagggaggcgagaagacagaagtaactgaagggtcgggagatggtgctaatcaacaacgt
cccttcaggaggcgtcgctacccaccatactacttccgtagaccgtatgggcgcagacct
cagtattccaaccccccagcccagggcgaaggagcagagggagcagaaaaccaaggtgca
ggagaccaagccagaccagtgagacagaatatgtatggaggatttagaccaagattccgc
aggggaccaccacgtcaaagacggccaagagaagacggtaatgaggaagacaaagagaat
cagggtgagggaacccaaagtcagcagccacctcaacgccggtaccgccgcaacttcaac
tacagacgtagacgcccagaaaaccctaaaccacaagatggtaaagagaccaaggcagcc
gaaacatcagcagaaaacacgtccgctcccgaggctgagcagggcggggctgagtaa
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integrated database retrieval system
