Pyxicephalus adspersus (African bullfrog): 140341821
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Entry
140341821 CDS
T11284
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140341821 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140341821 (CPSF2)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140341821 (CPSF2)
U7-dependent histone pre-mRNA processing factors
140341821 (CPSF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
ODP
Motif
Other DBs
NCBI-GeneID:
140341821
NCBI-ProteinID:
XP_072283809
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Position
12:46090584..46103588
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AA seq
783 aa
AA seq
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MTSIIKLTTLSGAQEESALCYLLQVDEFRFLLDCGWDENFSMEIIEAIKKYVHQVDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFNLYTLDDVD
SAFDKIQQLKFSQIVHLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMISRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGFADLARVPSPKVVLASQPDLECGFSRELFIQWCQDPKNSIILTYRTS
PGTLGRFLIDNPSEKIIDIELRKRVKLEGKELEEYLEKEKIKKEASKKLEQSKEADIDSS
DESEAEEDIDQPMVHKAKHDLMMKNEGSRKGSFFKQAKKSHPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLANGEEPMDQDLSDVPTKCISATEAMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPDASQDLAEACRAFGGKDIKVYTPKLHETVDAT
SETHIYQVRLKDSLVSSLKFCKAKDTELAWIDGVLDMRVSKVDTGVILEEGELKEEGDDS
DMQVDVPSVDASTIAHQKAIKSLFGDDDKEFAEESEIIPTLEPLLTNEIPGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCICEDFYKIRELLYSQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacttccatcattaagctgacgacgctctctggagcgcaggaagagtcggccctctgc
tacttgctgcaggtggatgaatttcgcttcctcctggactgtggctgggatgaaaatttt
tctatggagatcatcgaagccatcaaaaagtatgtccatcaggtggatgctgtccttctt
tctcacccagatccattacatcttggagctctcccctatgccgtgggcaagttaggatta
aactgcgctatatatgcaacgatccctgtatacaagatgggtcagatgttcatgtatgac
ttgtaccagtctcgacacaacacagaagattttaacttgtacaccctggatgatgtggat
tcagcatttgacaagatacagcaactgaaattctcacagatcgttcatttgaaaggaaaa
ggtcacggtttgtccatcaccccattaccagctggtcacatgattggaggcaccatatgg
aagattgtcaaggatggagaggaggagattgtgtatgctgtagatttcaaccacaagaga
gagatacatttaaatggctgctcactggaaatgatcagtcgtccatctctgctcatcaca
gacagttttaatgctacttatgtccagccaagaagaaaacaaagagatgaacaactgcta
accaatgtactggagacccttcgtggtgatggcaacgtgctaatcgctgtggacactgct
ggaagagtgctggaactggcacagctgctagatcagatttggagaaccaaggatgctgga
ctcggagtatactccctggcacttctaaataatgtcagttacaatgtggtggagttttca
aagtctcaggtggaatggatgagtgataagcttatgagatgttttgaagacaagaggaac
aatccatttcagttccgacatctctctctatgtcacggctttgcagaccttgcccgtgtt
cccagtccgaaagtggtgctggctagccaacctgacctggaatgtggcttttctagagag
ctgttcatccagtggtgtcaagatcctaaaaattccatcattcttacctaccggacttcc
cctgggactcttggacgattcctgatcgataacccttctgagaagatcatagatatagag
cttagaaaacgtgtgaaactggaaggaaaggagctggaggaatatctagagaaagagaag
ataaagaaagaagcttccaagaagcttgaacagtccaaagaggccgacattgactcaagt
gatgaaagtgaagcagaggaggacatcgatcagccgatggttcacaaggccaaacacgac
ctgatgatgaaaaacgagggcagtcggaagggctccttctttaaacaggccaaaaagtct
caccctatgttccccgcccctgaggagcgcatcaaatgggatgaatatggagaaatcata
aagcctgaggatttcctggttccagagctccaagcaactgaagaggagaagagcaagctt
gagtctggcttggcgaatggggaagaaccaatggaccaggatctgtctgatgttcctaca
aagtgcatctctgcaacagaggcaatggagataaaggccagggtcacatacatcgactat
gagggtcggtctgacggcgactccatcaagaagatcattaaccagatgaaaccccgacag
ctggttattgtccatgggcccccagatgccagtcaggaccttgcagaagcctgcagggcc
tttggaggaaaagacataaaagtttacaccccaaaacttcacgagactgtggatgccact
agtgaaactcacatttaccaggtcaggttaaaggactccctggtcagctctctcaagttc
tgcaaagccaaggatacggagctcgcctggatagatggggtgctggacatgcgggtgtcc
aaggtagacactggggtcatcttggaggaaggagaattgaaagaggagggggatgacagc
gacatgcaagtggatgttccatcagtggatgcttccaccattgctcatcagaaagctata
aagagcctgtttggagatgacgacaaagaatttgctgaggaaagtgagatcatccctaca
ttggagcccttgctaacgaacgagattcctggacatcagtctgtattcatgaatgagcca
agattatcagacttcaagcaagtcctgcttcgggaaggaatacaggcagaatttgttgga
ggtgtccttgtttgtaacaacttggtggcagttcgcaggacggagacaggacgcattggc
ttagaggggtgcatctgtgaggacttttacaaaatccgggaactcttgtattcccagtac
gccattgtttga
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